RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 STXBP3O00186 592 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 ARP10275 920 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 MARK3P27448 753 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 CDC27P30260 824 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
PRPF8-206ENST00000572723 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
PRPF8-206ENST00000572723 AP3B2Q13367 1082 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 MARCH8Q5T0T0 291 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 RUFY4Q6ZNE9 571 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 PLPPR4Q7Z2D5 763 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 GDPD5Q8WTR4 605 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 YME1L1Q96TA2 773 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 ANO3Q9BYT9 981 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 MTUS1Q9ULD2 1270 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 SIP14410 1827 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 REV3LO60673 3130 aa13.38□□□□□ -0.27
PRPF8-206ENST00000572723 TTC3P53804 2025 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 UPP2O95045 317 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 ATG7O95352 703 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 INSRRP14616 1297 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 ZNF76P36508 570 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 SREBF1P36956 1147 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 STAT5BP51692 787 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 ACTR2P61160 394 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 MGAT3Q09327 533 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 PFKFB3Q16875 520 aaPredicted RBP13.37□□□□□ -0.27
PRPF8-206ENST00000572723 MCTP2Q6DN12 878 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 DNAJB3Q8WWF6 145 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 PCYT2Q99447 389 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 C17orf80Q9BSJ5 609 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 AGO4Q9HCK5 861 aaKnown RBP13.37□□□□□ -0.27
PRPF8-206ENST00000572723 SQORQ9Y6N5 450 aa13.37□□□□□ -0.27
PRPF8-206ENST00000572723 RBAK-RBAKDNI3L0D1 243 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 ENPP3O14638 875 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 CYP3A4P08684 503 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 GHRP10912 638 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 SCG2P13521 617 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 HSPA4P34932 840 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 SLC26A2P50443 739 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 METAP2P50579 478 aaKnown RBP eCLIP13.36□□□□□ -0.277e-7■■□□□ 14.4
PRPF8-206ENST00000572723 LPIN1Q14693 890 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 EPC2Q52LR7 807 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 IER5Q5VY09 327 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 BLOC1S2Q6QNY1 142 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 Q6ZUG5 572 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 NME8Q8N427 588 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 IL17RAQ96F46 866 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 PGBD1Q96JS3 809 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
PRPF8-206ENST00000572723 PCDHA2Q9Y5H9 948 aa13.36□□□□□ -0.27
PRPF8-206ENST00000572723 MYH9P35579 1960 aaKnown RBP13.35□□□□□ -0.27
PRPF8-206ENST00000572723 IGKV6D-21A0A0A0MT36 114 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-206ENST00000572723 ESYT2A0FGR8 921 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 H3BNC9 293 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 PRPF3O43395 683 aaKnown RBP13.35□□□□□ -0.27
PRPF8-206ENST00000572723 KCNQ1P51787 676 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 IGBP1P78318 339 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 MRPS6P82932 125 aaKnown RBP13.35□□□□□ -0.27
PRPF8-206ENST00000572723 APOBRQ0VD83 1088 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 ITGB3BPQ13352 177 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-206ENST00000572723 PLCB4Q15147 1175 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 PTPROQ16827 1216 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 FBXO47Q5MNV8 452 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 FAM43BQ6ZT52 329 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-206ENST00000572723 TMEM192Q8IY95 271 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 CCDC12Q8WUD4 166 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-206ENST00000572723 MRPL38Q96DV4 380 aaKnown RBP13.35□□□□□ -0.27
PRPF8-206ENST00000572723 CCDC136Q96JN2 1154 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
PRPF8-206ENST00000572723 ZMYND12Q9H0C1 365 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 C6orf50Q9HD87 102 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 TMEM260Q9NX78 707 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 SNX14Q9Y5W7 946 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 CDY2AQ9Y6F7 541 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 EVPLQ92817 2033 aa13.35□□□□□ -0.27
PRPF8-206ENST00000572723 POTEB3A0JP26 581 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 RB1P06400 928 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 CPA1P15085 419 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 PSMA5P28066 241 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 GNA11P29992 359 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 GPM6BQ13491 265 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 POTEBQ6S5H4 581 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 ABHD15Q6UXT9 468 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 TSHZ1Q6ZSZ6 1077 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 PLA2G4DQ86XP0 818 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 FIBCD1Q8N539 461 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 BRF1Q92994 677 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 AGXT2Q9BYV1 514 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 LOXHD1Q8IVV2 1947 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 MUC3AQ02505 3323 aa13.34□□□□□ -0.27
PRPF8-206ENST00000572723 SMIM35A0A1B0GVV1 85 aa13.33□□□□□ -0.28
PRPF8-206ENST00000572723 FAM86B1E9PN63 330 aa13.33□□□□□ -0.28
PRPF8-206ENST00000572723 M0QZ92 97 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms