RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 FAM207AQ9NSI2 230 aaPredicted RBP20.04■□□□□ 0.8
SMPD3-211ENST00000568373 TRAF3IP3Q9Y228 551 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 GAP43P17677 238 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 ADAM9Q13443 819 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 BMT2Q1RMZ1 405 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 TRIM59Q8IWR1 403 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 IL31RAQ8NI17 732 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 SYTL5Q8TDW5 730 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-211ENST00000568373 NACC1Q96RE7 527 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 WRNIP1Q96S55 665 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 MMRN2Q9H8L6 949 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 AS3MTQ9HBK9 375 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 OLFML3Q9NRN5 406 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 KCNH7Q9NS40 1196 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 PARP14Q460N5 1801 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 FRMPD4Q14CM0 1322 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 EPHB6O15197 1021 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 ZBED4O75132 1171 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 FDX1P10109 184 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 MYBP10242 640 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 HNRNPH3P31942 346 aaKnown RBP20.03■□□□□ 0.8
SMPD3-211ENST00000568373 HOXD13P35453 343 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 PCNX4Q63HM2 1172 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 C1orf186Q6ZWK4 172 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 CCDC170Q8IYT3 715 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 ZKSCAN4Q969J2 545 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-211ENST00000568373 PICK1Q9NRD5 415 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 MYO1AQ9UBC5 1043 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 CTDP1Q9Y5B0 961 aaPredicted RBP20.03■□□□□ 0.8
SMPD3-211ENST00000568373 MRFAP1Q9Y605 127 aa20.03■□□□□ 0.8
SMPD3-211ENST00000568373 CETN3O15182 167 aa20.02■□□□□ 0.8
SMPD3-211ENST00000568373 CYLC1P35663 651 aaPredicted RBP20.02■□□□□ 0.8
SMPD3-211ENST00000568373 ELF2Q15723 593 aa20.02■□□□□ 0.8
SMPD3-211ENST00000568373 ZNF569Q5MCW4 686 aa20.02■□□□□ 0.8
SMPD3-211ENST00000568373 ZNF280CQ8ND82 737 aa20.02■□□□□ 0.8
SMPD3-211ENST00000568373 NHEJ1Q9H9Q4 299 aaPredicted RBP20.02■□□□□ 0.8
SMPD3-211ENST00000568373 WRAP73Q9P2S5 460 aaPredicted RBP20.02■□□□□ 0.8
SMPD3-211ENST00000568373 PLAGL2Q9UPG8 496 aa20.02■□□□□ 0.8
SMPD3-211ENST00000568373 PDXKO00764 312 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 ZBTB39O15060 712 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 ABL1P00519 1130 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 PTPRAP18433 802 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 NR2F2P24468 414 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 MNS1Q8NEH6 495 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 NEK9Q8TD19 979 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 TRPM4Q8TD43 1214 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.01■□□□□ 0.79
SMPD3-211ENST00000568373 UBIAD1Q9Y5Z9 338 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 LOXHD1Q8IVV2 1947 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 VWA5AO00534 786 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 PRPF6O94906 941 aaKnown RBP20.01■□□□□ 0.79
SMPD3-211ENST00000568373 FAM13AO94988 1023 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 RPS6P62753 249 aaKnown RBP20.01■□□□□ 0.79
SMPD3-211ENST00000568373 KRT83P78385 493 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 TKFCQ3LXA3 575 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 PRAMEF18Q5VWM3 479 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 LXNQ9BS40 222 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 CARD6Q9BX69 1037 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 EDEM3Q9BZQ6 932 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 GPRC5DQ9NZD1 345 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 KCND2Q9NZV8 630 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 CGNQ9P2M7 1197 aaKnown RBP20.01■□□□□ 0.79
SMPD3-211ENST00000568373 FAM184BQ9ULE4 1060 aa20.01■□□□□ 0.79
SMPD3-211ENST00000568373 CALUO43852 315 aaPredicted RBP20■□□□□ 0.79
SMPD3-211ENST00000568373 GCNT3O95395 438 aa20■□□□□ 0.79
SMPD3-211ENST00000568373 HERVK_113P62684 666 aa20■□□□□ 0.79
SMPD3-211ENST00000568373 MRPS9P82933 396 aaKnown RBP20■□□□□ 0.79
SMPD3-211ENST00000568373 KCNMA1Q12791 1236 aa20■□□□□ 0.79
SMPD3-211ENST00000568373 CCDC155Q8N6L0 562 aa20■□□□□ 0.79
SMPD3-211ENST00000568373 NEK11Q8NG66 645 aa20■□□□□ 0.79
SMPD3-211ENST00000568373 SMCR8Q8TEV9 937 aaPredicted RBP20■□□□□ 0.79
SMPD3-211ENST00000568373 TRERF1Q96PN7 1200 aa20■□□□□ 0.79
SMPD3-211ENST00000568373 HAUS4Q9H6D7 363 aa20■□□□□ 0.79
SMPD3-211ENST00000568373 JADE2Q9NQC1 790 aa20■□□□□ 0.79
SMPD3-211ENST00000568373 EIF3CLB5ME19 914 aaKnown RBP19.99■□□□□ 0.79
SMPD3-211ENST00000568373 DDX39AO00148 427 aaKnown RBP19.99■□□□□ 0.79
SMPD3-211ENST00000568373 DHX15O43143 795 aaKnown RBP19.99■□□□□ 0.79
SMPD3-211ENST00000568373 ERCC6LQ2NKX8 1250 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 ZNF662Q6ZS27 426 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 ARHGAP27Q6ZUM4 889 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 UBE2Q2Q8WVN8 375 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 ATG4CQ96DT6 458 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 TAAR1Q96RJ0 339 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 EIF3CQ99613 913 aaKnown RBP19.99■□□□□ 0.79
SMPD3-211ENST00000568373 BCAS3Q9H6U6 928 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 PARVGQ9HBI0 331 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 AGO4Q9HCK5 861 aaKnown RBP19.99■□□□□ 0.79
SMPD3-211ENST00000568373 POLD4Q9HCU8 107 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 TYW1Q9NV66 732 aaKnown RBP19.99■□□□□ 0.79
SMPD3-211ENST00000568373 SFI1A8K8P3 1242 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 EIF3DO15371 548 aaKnown RBP eCLIP19.99■□□□□ 0.79
SMPD3-211ENST00000568373 IPO7O95373 1038 aaKnown RBP19.99■□□□□ 0.79
SMPD3-211ENST00000568373 SLC35F6Q8N357 371 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 BANK1Q8NDB2 785 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 BAP1Q92560 729 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 C12orf42Q96LP6 360 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 GGA3Q9NZ52 723 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 PKD2L1Q9P0L9 805 aa19.99■□□□□ 0.79
SMPD3-211ENST00000568373 RLFQ13129 1914 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 TADA3O75528 432 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms