RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 GPC2Q8N158 579 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 KCTD17Q8N5Z5 321 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 CCDC155Q8N6L0 562 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 ETNPPLQ8TBG4 499 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 TRPM4Q8TD43 1214 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 GJA10Q969M2 543 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 EXOC4Q96A65 974 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 LENG9Q96B70 501 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 NUDT12Q9BQG2 462 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 RHOXF2Q9BQY4 288 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 IFIH1Q9BYX4 1025 aaKnown RBP19.57■□□□□ 0.72
CMTM3-214ENST00000567572 PANK4Q9NVE7 773 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 KIF11P52732 1056 aa19.56■□□□□ 0.72
CMTM3-214ENST00000567572 ANGEL2Q5VTE6 544 aaKnown RBP19.56■□□□□ 0.72
CMTM3-214ENST00000567572 DCAF15Q66K64 600 aa19.56■□□□□ 0.72
CMTM3-214ENST00000567572 KCNK18Q7Z418 384 aa19.56■□□□□ 0.72
CMTM3-214ENST00000567572 NEK11Q8NG66 645 aa19.56■□□□□ 0.72
CMTM3-214ENST00000567572 ALS2CR12Q96Q35 445 aa19.56■□□□□ 0.72
CMTM3-214ENST00000567572 CEP72Q9P209 647 aa19.56■□□□□ 0.72
CMTM3-214ENST00000567572 ARHGAP20Q9P2F6 1191 aa19.56■□□□□ 0.72
CMTM3-214ENST00000567572 FAM184BQ9ULE4 1060 aa19.56■□□□□ 0.72
CMTM3-214ENST00000567572 SBF1O95248 1867 aa19.56■□□□□ 0.72
CMTM3-214ENST00000567572 RCCD1A6NED2 376 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 CYP3A4P08684 503 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 INPP5BP32019 993 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 CCDC70Q6NSX1 233 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 PDXDC1Q6P996 788 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 BAP1Q92560 729 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 MED4Q9NPJ6 270 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 LUC7LQ9NQ29 371 aaKnown RBP19.55■□□□□ 0.72
CMTM3-214ENST00000567572 ZNF112Q9UJU3 913 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 MRPL11Q9Y3B7 192 aaKnown RBP19.55■□□□□ 0.72
CMTM3-214ENST00000567572 PCDHA13Q9Y5I0 950 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 UTRNP46939 3433 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 FRMD3A2A2Y4 597 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 EDRF1Q3B7T1 1238 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 EEF2KMTQ96G04 330 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 DEF6Q9H4E7 631 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 MMRN2Q9H8L6 949 aa19.55■□□□□ 0.72
CMTM3-214ENST00000567572 FAM207AQ9NSI2 230 aaPredicted RBP19.55■□□□□ 0.72
CMTM3-214ENST00000567572 FAM86B1E9PN63 330 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 RBAK-RBAKDNI3L0D1 243 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 ENC1O14682 589 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 ZNF263O14978 683 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 POLR3GO15318 223 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-214ENST00000567572 FAM86B2P0C5J1 330 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 CASP8Q14790 479 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 PRR16Q569H4 304 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 LDHDQ86WU2 507 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 RNF10Q8N5U6 811 aaKnown RBP19.54■□□□□ 0.72
CMTM3-214ENST00000567572 HOOK2Q96ED9 719 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 MMS19Q96T76 1030 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 CALCOCO1Q9P1Z2 691 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 TSKSQ9UJT2 592 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 SNX12Q9UMY4 172 aa19.54■□□□□ 0.72
CMTM3-214ENST00000567572 LRRC53A6NM62 1247 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 GCOM1H8Y6P7 765 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-214ENST00000567572 ICAM1P05362 532 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 PLA2G4BP0C869 781 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 POLR2MP0CAP2 368 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 TCP1P17987 556 aaKnown RBP19.53■□□□□ 0.72
CMTM3-214ENST00000567572 SPIRE1Q08AE8 756 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 ERMNQ8TAM6 284 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 FHDC1Q9C0D6 1143 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-214ENST00000567572 HDAC6Q9UBN7 1215 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 PCDHA2Q9Y5H9 948 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 ZNF536O15090 1300 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 AKR1B10O60218 316 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 CFBP00751 764 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 EIF4A3P38919 411 aaKnown RBP19.53■□□□□ 0.72
CMTM3-214ENST00000567572 ECM1Q16610 540 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 ASTE1Q2TB18 679 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-214ENST00000567572 CCDC40Q4G0X9 1142 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 CACNA2D4Q7Z3S7 1137 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 SCYL3Q8IZE3 742 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 PRPF38AQ8NAV1 312 aaKnown RBP19.53■□□□□ 0.72
CMTM3-214ENST00000567572 CAGE1Q8TC20 777 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 FAM71BQ8TC56 605 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 TBC1D5Q92609 795 aa19.53■□□□□ 0.72
CMTM3-214ENST00000567572 H3BQF6 201 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 TFRCP02786 760 aaKnown RBP19.52■□□□□ 0.72
CMTM3-214ENST00000567572 CYP27A1Q02318 531 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 HSP90B2PQ58FF3 399 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 RRAGAQ7L523 313 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 TRIM59Q8IWR1 403 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 MMGT1Q8N4V1 131 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 FAM20AQ96MK3 541 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 WDR18Q9BV38 432 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 GGA3Q9NZ52 723 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 PPP2R3BQ9Y5P8 575 aa19.52■□□□□ 0.72
CMTM3-214ENST00000567572 SSC5DA1L4H1 1573 aa19.52■□□□□ 0.71
CMTM3-214ENST00000567572 MACROD2A1Z1Q3 448 aa19.51■□□□□ 0.71
CMTM3-214ENST00000567572 TRAF5O00463 557 aa19.51■□□□□ 0.71
CMTM3-214ENST00000567572 EPHB6O15197 1021 aa19.51■□□□□ 0.71
CMTM3-214ENST00000567572 VCAM1P19320 739 aa19.51■□□□□ 0.71
CMTM3-214ENST00000567572 EPS15P42566 896 aa19.51■□□□□ 0.71
CMTM3-214ENST00000567572 AARSP49588 968 aaKnown RBP eCLIP19.51■□□□□ 0.71
CMTM3-214ENST00000567572 HIRAP54198 1017 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-214ENST00000567572 DGKZQ13574 1117 aa19.51■□□□□ 0.71
CMTM3-214ENST00000567572 MTMR2Q13614 643 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms