RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ARHGAP28Q9P2N2 729 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.83□□□□□ -1.32
USP8-218ENST00000561330 CBX4O00257 560 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 TRAF5O00463 557 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 KPNA6O60684 536 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 KRT37O76014 449 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 C4BPAP04003 597 aaKnown RBP6.83□□□□□ -1.32
USP8-218ENST00000561330 RPL13P26373 211 aaKnown RBP6.83□□□□□ -1.32
USP8-218ENST00000561330 SARSP49591 514 aaKnown RBP6.83□□□□□ -1.32
USP8-218ENST00000561330 MECP2P51608 486 aaKnown RBP6.83□□□□□ -1.32
USP8-218ENST00000561330 IRF9Q00978 393 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 PFKPQ01813 784 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 FZD5Q13467 585 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 SEC23AQ15436 765 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 SKIDA1Q1XH10 827 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 OTOP1Q7RTM1 612 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 DTX3Q8N9I9 347 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 TP53I13Q8NBR0 393 aaPredicted RBP6.83□□□□□ -1.32
USP8-218ENST00000561330 CROTQ9UKG9 612 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 B3GALT1Q9Y5Z6 326 aa6.83□□□□□ -1.32
USP8-218ENST00000561330 PTPDC1A2A3K4 754 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 ZNF839A8K0R7 811 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 BMP7P18075 431 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 POU3F2P20265 443 aaPredicted RBP6.82□□□□□ -1.32
USP8-218ENST00000561330 HERVK_113P62684 666 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 TM4SF20Q53R12 229 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 FSTL4Q6MZW2 842 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 CARFQ8N187 725 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 PPM1KQ8N3J5 372 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 IGDCC4Q8TDY8 1250 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 DLG3Q92796 817 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 SLC39A2Q9NP94 309 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 ARHGAP20Q9P2F6 1191 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 B4GALT6Q9UBX8 382 aa6.82□□□□□ -1.32
USP8-218ENST00000561330 ZBTB48P10074 688 aaPredicted RBP6.81□□□□□ -1.32
USP8-218ENST00000561330 MYCLP1P12525 358 aaPredicted RBP6.81□□□□□ -1.32
USP8-218ENST00000561330 GLRBP48167 497 aa6.81□□□□□ -1.32
USP8-218ENST00000561330 SLURP1P55000 103 aa6.81□□□□□ -1.32
USP8-218ENST00000561330 TMEM132BQ14DG7 1078 aa6.81□□□□□ -1.32
USP8-218ENST00000561330 PRAMEF18Q5VWM3 479 aa6.81□□□□□ -1.32
USP8-218ENST00000561330 KIF18BQ86Y91 864 aa6.81□□□□□ -1.32
USP8-218ENST00000561330 AHI1Q8N157 1196 aa6.81□□□□□ -1.32
USP8-218ENST00000561330 ORAI3Q9BRQ5 295 aa6.81□□□□□ -1.32
USP8-218ENST00000561330 TARS2Q9BW92 718 aaKnown RBP6.81□□□□□ -1.32
USP8-218ENST00000561330 MTFR1LQ9H019 292 aa6.81□□□□□ -1.32
USP8-218ENST00000561330 ZKSCAN5Q9Y2L8 839 aa6.81□□□□□ -1.32
USP8-218ENST00000561330 FAM83GA6ND36 823 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 H7C1D1 291 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 DDX3XO00571 662 aaKnown RBP eCLIP6.8□□□□□ -1.32
USP8-218ENST00000561330 FOXP2O15409 715 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 TRIM13O60858 407 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 FBXO21O94952 628 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 MMEP08473 750 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 RTP5Q14D33 572 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 PRR31Q5SQ13 230 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 PHF19Q5T6S3 580 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 SP8Q8IXZ3 490 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 SPATA25Q9BR10 227 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 LUC7LQ9NQ29 371 aaKnown RBP6.8□□□□□ -1.32
USP8-218ENST00000561330 IFT57Q9NWB7 429 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 ZFP69BQ9UJL9 534 aa6.8□□□□□ -1.32
USP8-218ENST00000561330 PDE8AO60658 829 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 GAS7O60861 476 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 SASH1O94885 1247 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 PTGS1P23219 599 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 AOAHP28039 575 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 IL13P35225 146 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 KCNC1P48547 511 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 MLLT6P55198 1093 aaPredicted RBP6.79□□□□□ -1.32
USP8-218ENST00000561330 PCBP1Q15365 356 aaKnown RBP eCLIP6.79□□□□□ -1.32
USP8-218ENST00000561330 ZNF174Q15697 407 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 CC2D1AQ6P1N0 951 aaPredicted RBP6.79□□□□□ -1.32
USP8-218ENST00000561330 MARCH10Q8NA82 808 aaPredicted RBP6.79□□□□□ -1.32
USP8-218ENST00000561330 GBP4Q96PP9 640 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 ZCCHC4Q9H5U6 513 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 L2HGDHQ9H9P8 463 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 BTBD7Q9P203 1132 aa6.79□□□□□ -1.32
USP8-218ENST00000561330 A0A087X0B3 334 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 GSG1L2A8MUP6 293 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 F2P00734 622 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 CHGBP05060 677 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 ZNF28P17035 718 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 SDHAP31040 664 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 KIF11P52732 1056 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 TRMT10BQ6PF06 316 aaKnown RBP6.78□□□□□ -1.32
USP8-218ENST00000561330 STPG3Q8N7X2 389 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 HIPK4Q8NE63 616 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 ADAMTS17Q8TE56 1095 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 ASB15Q8WXK1 588 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 PCIF1Q9H4Z3 704 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP8-218ENST00000561330 ACSS2Q9NR19 701 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 MAPRE3Q9UPY8 281 aa6.78□□□□□ -1.32
USP8-218ENST00000561330 DVL2O14641 736 aa6.77□□□□□ -1.33
USP8-218ENST00000561330 SCNN1BP51168 640 aa6.77□□□□□ -1.33
USP8-218ENST00000561330 SART3Q15020 963 aaKnown RBP6.77□□□□□ -1.33
USP8-218ENST00000561330 SMAD2Q15796 467 aaKnown RBP6.77□□□□□ -1.33
USP8-218ENST00000561330 CATSPEREQ5SY80 951 aa6.77□□□□□ -1.33
USP8-218ENST00000561330 SPOCD1Q6ZMY3 1216 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms