RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ATN1P54259 1190 aaPredicted RBP24.39■■□□□ 1.49
SNX1-206ENST00000559389 LRRC26Q2I0M4 334 aa24.39■■□□□ 1.49
SNX1-206ENST00000559389 NBPF20Q3BBV1 942 aa24.39■■□□□ 1.49
SNX1-206ENST00000559389 SWSAP1Q6NVH7 229 aa24.39■■□□□ 1.49
SNX1-206ENST00000559389 VTI1AQ96AJ9 217 aa24.39■■□□□ 1.49
SNX1-206ENST00000559389 GABBR1Q9UBS5 961 aa24.39■■□□□ 1.49
SNX1-206ENST00000559389 CIZ1Q9ULV3 898 aaPredicted RBP24.39■■□□□ 1.49
SNX1-206ENST00000559389 MAFBQ9Y5Q3 323 aaPredicted RBP24.39■■□□□ 1.49
SNX1-206ENST00000559389 MORC2Q9Y6X9 1032 aaPredicted RBP24.39■■□□□ 1.49
SNX1-206ENST00000559389 ARVCFO00192 962 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 MARK3P27448 753 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 TECP42680 631 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 SLC26A2P50443 739 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 EPHA7Q15375 998 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 IL17AQ16552 155 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 UGCGQ16739 394 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 PDXDC2PQ6P474 469 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 NFRKBQ6P4R8 1299 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 SESTD1Q86VW0 696 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 SEZ6LQ9BYH1 1024 aa24.38■■□□□ 1.49
SNX1-206ENST00000559389 CDK7P50613 346 aa24.37■■□□□ 1.49
SNX1-206ENST00000559389 TRIM60Q495X7 471 aa24.37■■□□□ 1.49
SNX1-206ENST00000559389 ATL3Q6DD88 541 aa24.37■■□□□ 1.49
SNX1-206ENST00000559389 DTHD1Q6ZMT9 781 aa24.37■■□□□ 1.49
SNX1-206ENST00000559389 IGSF22Q8N9C0 903 aa24.37■■□□□ 1.49
SNX1-206ENST00000559389 PPP1R13LQ8WUF5 828 aa24.37■■□□□ 1.49
SNX1-206ENST00000559389 ATP6V0A1Q93050 837 aa24.37■■□□□ 1.49
SNX1-206ENST00000559389 IPO9Q96P70 1041 aaKnown RBP24.37■■□□□ 1.49
SNX1-206ENST00000559389 ZNF862O60290 1169 aa24.36■■□□□ 1.49
SNX1-206ENST00000559389 RGS19P49795 217 aa24.36■■□□□ 1.49
SNX1-206ENST00000559389 RTP1P59025 263 aa24.36■■□□□ 1.49
SNX1-206ENST00000559389 CHMP4BP1P59074 171 aa24.36■■□□□ 1.49
SNX1-206ENST00000559389 CEBPZQ03701 1054 aaKnown RBP24.36■■□□□ 1.49
SNX1-206ENST00000559389 PTPN11Q06124 597 aaPredicted RBP24.36■■□□□ 1.49
SNX1-206ENST00000559389 PLCB4Q15147 1175 aa24.36■■□□□ 1.49
SNX1-206ENST00000559389 FOXD4L6Q3SYB3 417 aaPredicted RBP24.36■■□□□ 1.49
SNX1-206ENST00000559389 FOXD4L3Q6VB84 417 aaPredicted RBP24.36■■□□□ 1.49
SNX1-206ENST00000559389 NEK9Q8TD19 979 aa24.36■■□□□ 1.49
SNX1-206ENST00000559389 HTATIP2Q9BUP3 242 aa24.36■■□□□ 1.49
SNX1-206ENST00000559389 RAB34Q9BZG1 259 aa24.36■■□□□ 1.49
SNX1-206ENST00000559389 RNPEPQ9H4A4 650 aa24.36■■□□□ 1.49
SNX1-206ENST00000559389 MROH7Q68CQ1 1323 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 YEATS4O95619 227 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 SMIM10L2AP0DMW4 78 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 SMIM10L2BP0DMW5 78 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 ATP4AP20648 1035 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 HOXC8P31273 242 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 DNM1Q05193 864 aaKnown RBP24.35■■□□□ 1.49
SNX1-206ENST00000559389 SLC39A14Q15043 492 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 FAM47CQ5HY64 1035 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 ANKRD33Q7Z3H0 272 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 FAM126BQ8IXS8 530 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 BANK1Q8NDB2 785 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 ATP8B4Q8TF62 1192 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 EIF2AK1Q9BQI3 630 aaKnown RBP24.35■■□□□ 1.49
SNX1-206ENST00000559389 HDAC6Q9UBN7 1215 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 GTF2IRD1Q9UHL9 959 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 ATP6V1DQ9Y5K8 247 aa24.35■■□□□ 1.49
SNX1-206ENST00000559389 MYH9P35579 1960 aaKnown RBP24.34■■□□□ 1.49
SNX1-206ENST00000559389 VWA3AA6NCI4 1184 aa24.34■■□□□ 1.49
SNX1-206ENST00000559389 PSMC5P62195 406 aa24.34■■□□□ 1.49
SNX1-206ENST00000559389 PRKCEQ02156 737 aa24.34■■□□□ 1.49
SNX1-206ENST00000559389 PDIA5Q14554 519 aa24.34■■□□□ 1.49
SNX1-206ENST00000559389 C7orf31Q8N865 590 aa24.34■■□□□ 1.49
SNX1-206ENST00000559389 LINC00301Q8NCQ3 95 aa24.34■■□□□ 1.49
SNX1-206ENST00000559389 DYDC2Q96IM9 177 aa24.34■■□□□ 1.49
SNX1-206ENST00000559389 LXNQ9BS40 222 aa24.34■■□□□ 1.49
SNX1-206ENST00000559389 RGL1Q9NZL6 768 aa24.34■■□□□ 1.49
SNX1-206ENST00000559389 TFIP11Q9UBB9 837 aaKnown RBP24.34■■□□□ 1.49
SNX1-206ENST00000559389 P4HBP07237 508 aaKnown RBP24.33■■□□□ 1.49
SNX1-206ENST00000559389 QARSP47897 775 aaKnown RBP24.33■■□□□ 1.49
SNX1-206ENST00000559389 CYP4A11Q02928 519 aa24.33■■□□□ 1.49
SNX1-206ENST00000559389 STK38Q15208 465 aa24.33■■□□□ 1.49
SNX1-206ENST00000559389 CKAP2LQ8IYA6 745 aa24.33■■□□□ 1.49
SNX1-206ENST00000559389 ERMNQ8TAM6 284 aa24.33■■□□□ 1.49
SNX1-206ENST00000559389 FAM167AQ96KS9 214 aa24.33■■□□□ 1.49
SNX1-206ENST00000559389 HSD17B14Q9BPX1 270 aa24.33■■□□□ 1.49
SNX1-206ENST00000559389 WRAP73Q9P2S5 460 aaPredicted RBP24.33■■□□□ 1.49
SNX1-206ENST00000559389 LRWD1Q9UFC0 647 aa24.33■■□□□ 1.49
SNX1-206ENST00000559389 FBXO2Q9UK22 296 aaPredicted RBP24.33■■□□□ 1.49
SNX1-206ENST00000559389 TRPC6Q9Y210 931 aa24.33■■□□□ 1.49
SNX1-206ENST00000559389 ATP11BQ9Y2G3 1177 aa24.33■■□□□ 1.49
SNX1-206ENST00000559389 POTEB3A0JP26 581 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 PQBP1O60828 265 aaKnown RBP24.32■■□□□ 1.48
SNX1-206ENST00000559389 OATP04181 439 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 GRIN1Q05586 938 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 PPFIA1Q13136 1202 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 HIC1Q14526 733 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 HAUS3Q68CZ6 603 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 POTEBQ6S5H4 581 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 BBXQ8WY36 941 aaPredicted RBP24.32■■□□□ 1.48
SNX1-206ENST00000559389 CHAMP1Q96JM3 812 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 TOX2Q96NM4 488 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 CFAP45Q9UL16 551 aa24.32■■□□□ 1.48
SNX1-206ENST00000559389 COL1A2P08123 1366 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 PP2D1A8MPX8 630 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 HBP1O60381 514 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 B4GALT4O60513 344 aa24.31■■□□□ 1.48
SNX1-206ENST00000559389 DKC1O60832 514 aaKnown RBP eCLIP24.31■■□□□ 1.48
SNX1-206ENST00000559389 STBD1O95210 358 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms