RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 SNRNP48Q6IEG0 339 aaKnown RBP16.1■□□□□ 0.17
TRAPPC6B-206ENST00000556765 TLK2Q86UE8 772 aa16.1■□□□□ 0.17
TRAPPC6B-206ENST00000556765 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
TRAPPC6B-206ENST00000556765 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
TRAPPC6B-206ENST00000556765 FGD4Q96M96 766 aa16.1■□□□□ 0.17
TRAPPC6B-206ENST00000556765 PIGSQ96S52 555 aa16.1■□□□□ 0.17
TRAPPC6B-206ENST00000556765 KATNBL1Q9H079 304 aa16.1■□□□□ 0.17
TRAPPC6B-206ENST00000556765 JMJD4Q9H9V9 463 aa16.1■□□□□ 0.17
TRAPPC6B-206ENST00000556765 FRMPD2Q68DX3 1309 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC6B-206ENST00000556765 DCHS1Q96JQ0 3298 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 SMCO2A6NFE2 343 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 ZEB2O60315 1214 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 RFC2P35250 354 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 ADCY7P51828 1080 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 ATP2C1P98194 919 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 SNW1Q13573 536 aaKnown RBP16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 NONOQ15233 471 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 UVSSAQ2YD98 709 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 FAM160B2Q86V87 743 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 FMR1NBQ8N0W7 255 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 REXO1Q8N1G1 1221 aaKnown RBP16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 SUGCTQ9HAC7 445 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 GPCPD1Q9NPB8 672 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 TRMT13Q9NUP7 481 aaKnown RBP16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 MTUS1Q9ULD2 1270 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 RIPK3Q9Y572 518 aa16.09■□□□□ 0.17
TRAPPC6B-206ENST00000556765 RIF1Q5UIP0 2472 aaKnown RBP16.08■□□□□ 0.17
TRAPPC6B-206ENST00000556765 H3BQ06 376 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 NDUFB10O96000 172 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 SUPT20HL2P0C7V6 817 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 IER5LQ5T953 404 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 KANK3Q6NY19 840 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 SASS6Q6UVJ0 657 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PIK3AP1Q6ZUJ8 805 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 GAS2L3Q86XJ1 694 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 NEK9Q8TD19 979 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 CHURC1Q8WUH1 139 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 CUL5Q93034 780 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 UBA5Q9GZZ9 404 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 AP5M1Q9H0R1 490 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 RIC8AQ9NPQ8 531 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PRKAG3Q9UGI9 489 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PCDHA6Q9UN73 950 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 GNEQ9Y223 722 aaKnown RBP16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 HPSEQ9Y251 543 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PCDHA8Q9Y5H6 950 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 DMDP11532 3685 aa16.08■□□□□ 0.16
TRAPPC6B-206ENST00000556765 TECTAO75443 2155 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 C19orf67A6NJJ6 358 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 BAIAP3O94812 1187 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PRPHP41219 470 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 SYKP43405 635 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 STAT2P52630 851 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 SYDE2Q5VT97 1194 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PIBF1Q8WXW3 757 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PRRX2Q99811 253 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 FUCA2Q9BTY2 467 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 GOLPH3LQ9H4A5 285 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 FBXO2Q9UK22 296 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 FAM50BQ9Y247 325 aa16.07■□□□□ 0.16
TRAPPC6B-206ENST00000556765 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 ZNF202O95125 648 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PFKFB1P16118 471 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PTGS1P23219 599 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 KCNJ6P48051 423 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 FAM83BQ5T0W9 1011 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 ADHFE1Q8IWW8 467 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 ANKRD35Q8N283 1001 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 TGS1Q96RS0 853 aaKnown RBP16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 SDF4Q9BRK5 362 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 AMNQ9BXJ7 453 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 VAT1LQ9HCJ6 419 aa16.06■□□□□ 0.16
TRAPPC6B-206ENST00000556765 CACNA1BQ00975 2339 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 RAD21O60216 631 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 FDX1P10109 184 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 IRS1P35568 1242 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 LONP1P36776 959 aaKnown RBP16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 NDUFA8P51970 172 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 ERVK-21P61565 698 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 TCF15Q12870 199 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 AP3B2Q13367 1082 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 ZRSR1Q15695 479 aaKnown RBP16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 CDC37Q16543 378 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 TMCO2Q7Z6W1 182 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 SLF1Q9BQI6 1058 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 MUTYHQ9UIF7 546 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 FEM1BQ9UK73 627 aa16.05■□□□□ 0.16
TRAPPC6B-206ENST00000556765 PTPRSQ13332 1948 aa16.04■□□□□ 0.16
TRAPPC6B-206ENST00000556765 WDR87Q6ZQQ6 2873 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 461 ms