RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 CCDC60Q8IWA6 550 aaPredicted RBP15.92■□□□□ 0.14
SNX6-206ENST00000556162 AFAP1L1Q8TED9 768 aa15.92■□□□□ 0.14
SNX6-206ENST00000556162 RAB34Q9BZG1 259 aa15.92■□□□□ 0.14
SNX6-206ENST00000556162 FTOQ9C0B1 505 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNX6-206ENST00000556162 TFIP11Q9UBB9 837 aaKnown RBP15.92■□□□□ 0.14
SNX6-206ENST00000556162 GABBR1Q9UBS5 961 aa15.92■□□□□ 0.14
SNX6-206ENST00000556162 ARVCFO00192 962 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 HAS3O00219 553 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 SLC26A2P50443 739 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.14
SNX6-206ENST00000556162 PDIA5Q14554 519 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 PDXDC2PQ6P474 469 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 C7orf31Q8N865 590 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 TNPO1Q92973 898 aaKnown RBP15.91■□□□□ 0.14
SNX6-206ENST00000556162 CIZ1Q9ULV3 898 aaPredicted RBP15.91■□□□□ 0.14
SNX6-206ENST00000556162 MAFBQ9Y5Q3 323 aaPredicted RBP15.91■□□□□ 0.14
SNX6-206ENST00000556162 GRIN2DO15399 1336 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 MARK3P27448 753 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 FAM47CQ5HY64 1035 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 C1orf53Q5VUE5 145 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 NFRKBQ6P4R8 1299 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 HTATIP2Q9BUP3 242 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 LRWD1Q9UFC0 647 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 CFAP45Q9UL16 551 aa15.91■□□□□ 0.14
SNX6-206ENST00000556162 POTEMA6NI47 508 aa15.9■□□□□ 0.14
SNX6-206ENST00000556162 P4HBP07237 508 aaKnown RBP15.9■□□□□ 0.14
SNX6-206ENST00000556162 STK38Q15208 465 aa15.9■□□□□ 0.14
SNX6-206ENST00000556162 PTPAQ15257 358 aa15.9■□□□□ 0.14
SNX6-206ENST00000556162 CKAP2LQ8IYA6 745 aa15.9■□□□□ 0.14
SNX6-206ENST00000556162 SLC43A3Q8NBI5 491 aa15.9■□□□□ 0.14
SNX6-206ENST00000556162 ATP6V0A1Q93050 837 aa15.9■□□□□ 0.14
SNX6-206ENST00000556162 RNPEPQ9H4A4 650 aa15.9■□□□□ 0.14
SNX6-206ENST00000556162 VWA3AA6NCI4 1184 aa15.89■□□□□ 0.13
SNX6-206ENST00000556162 DKC1O60832 514 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNX6-206ENST00000556162 QARSP47897 775 aaKnown RBP15.89■□□□□ 0.13
SNX6-206ENST00000556162 NASPP49321 788 aaPredicted RBP15.89■□□□□ 0.13
SNX6-206ENST00000556162 CDK7P50613 346 aa15.89■□□□□ 0.13
SNX6-206ENST00000556162 DNM1Q05193 864 aaKnown RBP15.89■□□□□ 0.13
SNX6-206ENST00000556162 PTPN11Q06124 597 aaPredicted RBP15.89■□□□□ 0.13
SNX6-206ENST00000556162 SNX17Q15036 470 aa15.89■□□□□ 0.13
SNX6-206ENST00000556162 SLC39A14Q15043 492 aa15.89■□□□□ 0.13
SNX6-206ENST00000556162 IL17AQ16552 155 aa15.89■□□□□ 0.13
SNX6-206ENST00000556162 LRRC26Q2I0M4 334 aa15.89■□□□□ 0.13
SNX6-206ENST00000556162 IGSF22Q8N9C0 903 aa15.89■□□□□ 0.13
SNX6-206ENST00000556162 ERMNQ8TAM6 284 aa15.89■□□□□ 0.13
SNX6-206ENST00000556162 EIF2AK1Q9BQI3 630 aaKnown RBP15.89■□□□□ 0.13
SNX6-206ENST00000556162 MROH7Q68CQ1 1323 aa15.89■□□□□ 0.13
SNX6-206ENST00000556162 POTEB3A0JP26 581 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 MARCKSP29966 332 aaPredicted RBP15.88■□□□□ 0.13
SNX6-206ENST00000556162 PSMC5P62195 406 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 PLCB4Q15147 1175 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 POTEBQ6S5H4 581 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 TRMT1LQ7Z2T5 733 aaKnown RBP15.88■□□□□ 0.13
SNX6-206ENST00000556162 LINC00301Q8NCQ3 95 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 BANK1Q8NDB2 785 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 NEK9Q8TD19 979 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 PPP1R13LQ8WUF5 828 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 NRBP2Q9NSY0 501 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 RGL1Q9NZL6 768 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 HDAC6Q9UBN7 1215 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 TRPC6Q9Y210 931 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 ATP11BQ9Y2G3 1177 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 STK24Q9Y6E0 443 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 IGSF9BQ9UPX0 1349 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 SLITRK3O94933 977 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 YEATS4O95619 227 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 SMIM10L2AP0DMW4 78 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 SMIM10L2BP0DMW5 78 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 RGS19P49795 217 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 RTP1P59025 263 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 UGCGQ16739 394 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 TRIM60Q495X7 471 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 SESTD1Q86VW0 696 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 TPH2Q8IWU9 490 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 ATP8B4Q8TF62 1192 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 DYDC2Q96IM9 177 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 FAM167AQ96KS9 214 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 HSD17B14Q9BPX1 270 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 CHMP5Q9NZZ3 219 aa15.88■□□□□ 0.13
SNX6-206ENST00000556162 SCN10AQ9Y5Y9 1956 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 DCDC2CA8MYV0 355 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 HBP1O60381 514 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 PQBP1O60828 265 aaKnown RBP15.87■□□□□ 0.13
SNX6-206ENST00000556162 GNAT1P11488 350 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 NCLP19338 710 aaKnown RBP15.87■□□□□ 0.13
SNX6-206ENST00000556162 ATP4AP20648 1035 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 KRT85P78386 507 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 CYP4A11Q02928 519 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 CTTNQ14247 550 aaKnown RBP15.87■□□□□ 0.13
SNX6-206ENST00000556162 HAUS3Q68CZ6 603 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 ANKRD33Q7Z3H0 272 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 BBXQ8WY36 941 aaPredicted RBP15.87■□□□□ 0.13
SNX6-206ENST00000556162 AK8Q96MA6 479 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 TOX2Q96NM4 488 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 LXNQ9BS40 222 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 ZSWIM4Q9H7M6 989 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 GTF2IRD1Q9UHL9 959 aa15.87■□□□□ 0.13
SNX6-206ENST00000556162 SRPRBQ9Y5M8 271 aaKnown RBP15.87■□□□□ 0.13
SNX6-206ENST00000556162 MORC2Q9Y6X9 1032 aaPredicted RBP15.87■□□□□ 0.13
SNX6-206ENST00000556162 NRCAMQ92823 1304 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms