RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 G6PC3Q9BUM1 346 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 TAOK3Q9H2K8 898 aa5.35□□□□□ -1.55
VTI1B-203ENST00000554636 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.35□□□□□ -1.55
VTI1B-203ENST00000554636 LRRC37AA6NMS7 1700 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 COL4A1P02462 1669 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 COL4A5P29400 1685 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 EFEMP2O95967 443 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 GUCY2CP25092 1073 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 RAP1GAPP47736 663 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 CHRNEQ04844 493 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 AIMP1Q12904 312 aaKnown RBP5.34□□□□□ -1.55
VTI1B-203ENST00000554636 FZD5Q13467 585 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 TCIRG1Q13488 830 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 SLC14A2Q15849 920 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 CCDC93Q567U6 631 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 SLC10A5Q5PT55 438 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 AXDND1Q5T1B0 1012 aaPredicted RBP5.34□□□□□ -1.55
VTI1B-203ENST00000554636 SOGA3Q5TF21 947 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 OLFM4Q6UX06 510 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 PPP1R42Q7Z4L9 355 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 C7orf61Q8IZ16 206 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 TSPYL6Q8N831 410 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 C8orf58Q8NAV2 365 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 PLBD2Q8NHP8 589 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 LINC01599Q8WXQ3 324 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 BRF1Q92994 677 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 INTS4Q96HW7 963 aaKnown RBP5.34□□□□□ -1.55
VTI1B-203ENST00000554636 ISCA1Q9BUE6 129 aa5.34□□□□□ -1.55
VTI1B-203ENST00000554636 UTP14AQ9BVJ6 771 aaKnown RBP5.34□□□□□ -1.55
VTI1B-203ENST00000554636 DBF4Q9UBU7 674 aaPredicted RBP5.34□□□□□ -1.55
VTI1B-203ENST00000554636 GPR55Q9Y2T6 319 aaPredicted RBP5.34□□□□□ -1.55
VTI1B-203ENST00000554636 TAF1P21675 1872 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 IL16Q14005 1332 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 KDM2BQ8NHM5 1336 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 FANCIQ9NVI1 1328 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 SHOXO15266 292 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 SDHBP21912 280 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 PMS1P54277 932 aaKnown RBP5.33□□□□□ -1.56
VTI1B-203ENST00000554636 KIR3DS1Q14943 382 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 NOL9Q5SY16 702 aaKnown RBP5.33□□□□□ -1.56
VTI1B-203ENST00000554636 ADGRF1Q5T601 910 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 INTS3Q68E01 1043 aaKnown RBP5.33□□□□□ -1.56
VTI1B-203ENST00000554636 SYNE4Q8N205 404 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 TSR2Q969E8 191 aaKnown RBP5.33□□□□□ -1.56
VTI1B-203ENST00000554636 HHIPL1Q96JK4 782 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 CRAMP1Q96RY5 1269 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 PPP1R16BQ96T49 567 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 SLC6A17Q9H1V8 727 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 ACBD3Q9H3P7 528 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 CWC22Q9HCG8 908 aaKnown RBP5.33□□□□□ -1.56
VTI1B-203ENST00000554636 AP5S1Q9NUS5 200 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 HYPKQ9NX55 129 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 PCDHB10Q9UN67 800 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 CEP350Q5VT06 3117 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 DUOX1Q9NRD9 1551 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 CACNA1FO60840 1977 aa5.33□□□□□ -1.56
VTI1B-203ENST00000554636 LTBP1Q14766 1721 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 ABCC4O15439 1325 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 SH3TC1Q8TE82 1336 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 ZNF541Q9H0D2 1346 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 GLTPD2A6NH11 291 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 DBX1A6NMT0 343 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 NOTOA8MTQ0 251 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 H0Y8X5 98 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 ELL2O00472 640 aaPredicted RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 NFIBO00712 420 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 TOMM70O94826 608 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 C1QTNF9P0C862 333 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 HSPA6P17066 643 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 ALDH1B1P30837 517 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 NASPP49321 788 aaPredicted RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 EIF6P56537 245 aaKnown RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 RTP1P59025 263 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 NR0B2Q15466 257 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 PPP2R5EQ16537 467 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 CWF19L1Q69YN2 538 aaKnown RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 TAB3Q8N5C8 712 aaPredicted RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 CPLX3Q8WVH0 158 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 RPGRQ92834 1020 aaKnown RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 ZNF428Q96B54 188 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 PSMD1Q99460 953 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 PLCD4Q9BRC7 762 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 SRRTQ9BXP5 876 aaKnown RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 PHAXQ9H814 394 aaKnown RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 ZNF277Q9NRM2 450 aaPredicted RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 ERVK13-1Q9NX77 482 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 YBX2Q9Y2T7 364 aaKnown RBP5.32□□□□□ -1.56
VTI1B-203ENST00000554636 ZNF281Q9Y2X9 895 aa5.32□□□□□ -1.56
VTI1B-203ENST00000554636 ZNF521Q96K83 1311 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 ETV2O00321 342 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 ZNF205O95201 554 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 TSPAN15O95858 294 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 GSTM1P09488 218 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 TMEM253P0C7T8 217 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 VAV1P15498 845 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 BMP8BP34820 402 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 IARSP41252 1262 aaKnown RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 KIR2DL1P43626 348 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 KIR2DL2P43627 348 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 SOX9P48436 509 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms