RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 INSRRP14616 1297 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 IL9P15248 144 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 EXOSC10Q01780 885 aaKnown RBP13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 GPM6BQ13491 265 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 MTMR1Q13613 665 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 APOA5Q6Q788 366 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 RTN4RL1Q86UN2 441 aaPredicted RBP13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 TMTC2Q8N394 836 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 TMEM260Q9NX78 707 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 TUBE1Q9UJT0 475 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 CDY2AQ9Y6F7 541 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 FAM86C2PA6NEL3 165 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 H3BQ06 376 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 CALM1P0DP23 149 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 CALM2P0DP24 149 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 CALM3P0DP25 149 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 CPA1P15085 419 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 CDC27P30260 824 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 TMEM62Q0P6H9 643 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 ITGB3BPQ13352 177 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 TCEAL5Q5H9L2 206 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 FBXO47Q5MNV8 452 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 RPAINQ86UA6 219 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 GLG1Q92896 1179 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 MXRA8Q9BRK3 442 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 LRFN3Q9BTN0 628 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 FAM49AQ9H0Q0 323 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 KCNH7Q9NS40 1196 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 ERAP1Q9NZ08 941 aa13.24□□□□□ -0.29
PRPF40B-212ENST00000551111 SPDYE3A6NKU9 549 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 STXBP3O00186 592 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 GRM6O15303 877 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 CSPG5O95196 566 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 CD52P31358 61 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 GTF2F1P35269 517 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 PLCB4Q15147 1175 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 LEXMQ3ZCV2 418 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 GIMAP8Q8ND71 665 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 NEK1Q96PY6 1258 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 SMARCAD1Q9H4L7 1026 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 SLC9A2Q9UBY0 812 aa13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-212ENST00000551111 CCNE2O96020 404 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 LTBRP36941 435 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 GATMP50440 423 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 NAPAP54920 295 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 ACTR2P61160 394 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 MRPS6P82932 125 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 DLX2Q07687 328 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 PTCRAQ6ISU1 281 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 TAF2Q6P1X5 1199 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 FAM178BQ8IXR5 827 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 CRIPAKQ8N1N5 446 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 FIBCD1Q8N539 461 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 BANK1Q8NDB2 785 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 APBB2Q92870 758 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 ZNF689Q96CS4 500 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 IL17RAQ96F46 866 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 CDHR1Q96JP9 859 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 JPH1Q9HDC5 661 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 RIC8AQ9NPQ8 531 aa13.22□□□□□ -0.29
PRPF40B-212ENST00000551111 GRXCR2A6NFK2 248 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 DDX39AO00148 427 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 PPFIA3O75145 1194 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 CTNNB1P35222 781 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 ADD1P35611 737 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 CAMK1Q14012 370 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 RTN1Q16799 776 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 SAMD11Q96NU1 681 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 C1QTNF1Q9BXJ1 281 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 ANO3Q9BYT9 981 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 TMX1Q9H3N1 280 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 CDHR5Q9HBB8 845 aa13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 AGO4Q9HCK5 861 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-212ENST00000551111 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 KLF18A0A0U1RQI7 1052 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 SMCO2A6NFE2 343 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 FAM86B1E9PN63 330 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 MEIS1O00470 390 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 ZBTB43O43298 467 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 DGKIO75912 1065 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 FAM86B2P0C5J1 330 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 DNAJB1P25685 340 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 BMPR1AP36894 532 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 COL19A1Q14993 1142 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 TMEM266Q2M3C6 531 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 CEP55Q53EZ4 464 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 BMP2KLQ5H9B9 411 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 JAKMIP3Q5VZ66 844 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 TSHZ1Q6ZSZ6 1077 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 EP400NLQ6ZTU2 488 aa13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 CLP1Q92989 425 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-212ENST00000551111 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms