RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 LRFN2Q9ULH4 789 aa12.76□□□□□ -0.37
PFDN5-212ENST00000550880 CDY2AQ9Y6F7 541 aa12.76□□□□□ -0.37
PFDN5-212ENST00000550880 MRPL42Q9Y6G3 142 aaKnown RBP12.76□□□□□ -0.37
PFDN5-212ENST00000550880 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
PFDN5-212ENST00000550880 FRMPD4Q14CM0 1322 aa12.76□□□□□ -0.37
PFDN5-212ENST00000550880 RRN3P2A6NIE6 340 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 LOC730098B7Z3J9 87 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 IFIT3O14879 490 aaKnown RBP12.75□□□□□ -0.37
PFDN5-212ENST00000550880 ITGB1P05556 798 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 MARK3P27448 753 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 RRP1P56182 461 aaKnown RBP12.75□□□□□ -0.37
PFDN5-212ENST00000550880 MRPS6P82932 125 aaKnown RBP12.75□□□□□ -0.37
PFDN5-212ENST00000550880 SIGLEC14Q08ET2 396 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 SEMA3FQ13275 785 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 MYO7AQ13402 2215 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 IER5LQ5T953 404 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 CATIPQ7Z7H3 387 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 RBM23Q86U06 439 aaKnown RBP12.75□□□□□ -0.37
PFDN5-212ENST00000550880 SPPL3Q8TCT6 385 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 POF1BQ8WVV4 589 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 PHOX2BQ99453 314 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 PHF7Q9BWX1 381 aaPredicted RBP12.75□□□□□ -0.37
PFDN5-212ENST00000550880 TLE6Q9H808 572 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 AAASQ9NRG9 546 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 CLEC1BQ9P126 229 aa12.75□□□□□ -0.37
PFDN5-212ENST00000550880 SUPT16HQ9Y5B9 1047 aaKnown RBP12.75□□□□□ -0.37
PFDN5-212ENST00000550880 WDFY4Q6ZS81 3184 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 CD52P31358 61 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 IGBP1P78318 339 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 CAMK1Q14012 370 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 CBX2Q14781 532 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-212ENST00000550880 WTAPQ15007 396 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 PAN2Q504Q3 1202 aaKnown RBP12.74□□□□□ -0.37
PFDN5-212ENST00000550880 SPOUT1Q5T280 376 aaKnown RBP12.74□□□□□ -0.37
PFDN5-212ENST00000550880 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 FAM43BQ6ZT52 329 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-212ENST00000550880 CYB5R4Q7L1T6 521 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 PIBF1Q8WXW3 757 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 GPRASP2Q96D09 838 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
PFDN5-212ENST00000550880 RPGRIP1Q96KN7 1286 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 SEC63Q9UGP8 760 aaKnown RBP12.74□□□□□ -0.37
PFDN5-212ENST00000550880 USP15Q9Y4E8 981 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-212ENST00000550880 PCDHB12Q9Y5F1 795 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 ZNF318Q5VUA4 2279 aa12.74□□□□□ -0.37
PFDN5-212ENST00000550880 MBLAC1A4D2B0 266 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-212ENST00000550880 PIK3CDO00329 1044 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 CYTH3O43739 400 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 GFRA3O60609 400 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 SCG2P13521 617 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 DNAJB1P25685 340 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 UBE3AQ05086 875 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 PAK2Q13177 524 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 ADGRD2Q7Z7M1 963 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 RALYLQ86SE5 291 aaKnown RBP12.73□□□□□ -0.37
PFDN5-212ENST00000550880 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 ATOH1Q92858 354 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-212ENST00000550880 NEK1Q96PY6 1258 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 CDCA3Q99618 268 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-212ENST00000550880 FAM49AQ9H0Q0 323 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-212ENST00000550880 RWDD1Q9H446 243 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-212ENST00000550880 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 AZI2Q9H6S1 392 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 AGO3Q9H9G7 860 aaKnown RBP12.73□□□□□ -0.37
PFDN5-212ENST00000550880 BARX2Q9UMQ3 279 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-212ENST00000550880 PCDHB7Q9Y5E2 793 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 TRPV2Q9Y5S1 764 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-212ENST00000550880 LAMA4Q16363 1823 aa12.73□□□□□ -0.37
PFDN5-212ENST00000550880 MAFGO15525 162 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 ATF7P17544 494 aaPredicted RBP12.72□□□□□ -0.37
PFDN5-212ENST00000550880 KIF5BP33176 963 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 TCF15Q12870 199 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 MTMR1Q13613 665 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 AAMPQ13685 434 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 PDE12Q6L8Q7 609 aaKnown RBP12.72□□□□□ -0.37
PFDN5-212ENST00000550880 USP17L6PQ6QN14 398 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 PLEKHM2Q8IWE5 1019 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 PADI3Q9ULW8 664 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 TRPC6Q9Y210 931 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 TELO2Q9Y4R8 837 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 KAT6AQ92794 2004 aa12.72□□□□□ -0.37
PFDN5-212ENST00000550880 TECTAO75443 2155 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 TTC3P53804 2025 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 GSTTP1A0A1W2PQM5 241 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 INSRRP14616 1297 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 KCNA2P16389 499 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 IBSPP21815 317 aaPredicted RBP12.71□□□□□ -0.37
PFDN5-212ENST00000550880 NUBP1P53384 320 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 FOXK2Q01167 660 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 TROAPQ12815 778 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 SLC35G1Q2M3R5 365 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 ODR4Q5SWX8 454 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 MARCH8Q5T0T0 291 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 RTN4RL1Q86UN2 441 aaPredicted RBP12.71□□□□□ -0.37
PFDN5-212ENST00000550880 NME8Q8N427 588 aa12.71□□□□□ -0.37
PFDN5-212ENST00000550880 NCOA7Q8NI08 942 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms