RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 RABGGTBP53611 331 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 PTPN11Q06124 597 aaPredicted RBP9.42□□□□□ -0.9
LETMD1-225ENST00000550715 SUZ12Q15022 739 aaKnown RBP9.42□□□□□ -0.9
LETMD1-225ENST00000550715 LRRC41Q15345 812 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 HHIPL2Q6UWX4 724 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 PLEKHH3Q7Z736 793 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 SLC44A5Q8NCS7 719 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 UBASH3BQ8TF42 649 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 PLVAPQ9BX97 442 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 TANGO6Q9C0B7 1094 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 CCDC86Q9H6F5 360 aaKnown RBP9.42□□□□□ -0.9
LETMD1-225ENST00000550715 LRRFIP2Q9Y608 721 aaKnown RBP9.42□□□□□ -0.9
LETMD1-225ENST00000550715 TRIOO75962 3097 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 FAM186AA6NE01 2351 aa9.42□□□□□ -0.9
LETMD1-225ENST00000550715 A0A0A0MRY4 1105 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 ANKRD18BA2A2Z9 1011 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 TIMP1P01033 207 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 HOXB7P09629 217 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 CSF2RAP15509 400 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 CD68P34810 354 aaPredicted RBP9.41□□□□□ -0.9
LETMD1-225ENST00000550715 LINC00114Q6XXX2 140 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 SLC43A3Q8NBI5 491 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 NPLOC4Q8TAT6 608 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 PLA2G12BQ9BX93 195 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 CERS4Q9HA82 394 aa9.41□□□□□ -0.9
LETMD1-225ENST00000550715 MYBBP1AQ9BQG0 1328 aaKnown RBP9.4□□□□□ -0.9
LETMD1-225ENST00000550715 LOC100289279A0A1B0GTE1 492 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 EPOPA6NHQ4 379 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 GREM1O60565 184 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 CYBAP13498 195 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 CASP7P55210 303 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 RAC1P63000 192 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 APOBRQ0VD83 1088 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 PABPC4Q13310 644 aaKnown RBP eCLIP9.4□□□□□ -0.9
LETMD1-225ENST00000550715 MFSD5Q6N075 450 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.4□□□□□ -0.9
LETMD1-225ENST00000550715 MAP4K3Q8IVH8 894 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
LETMD1-225ENST00000550715 FMR1NBQ8N0W7 255 aaPredicted RBP9.4□□□□□ -0.9
LETMD1-225ENST00000550715 GPBAR1Q8TDU6 330 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 FAM86C1Q9NVL1 165 aa9.4□□□□□ -0.9
LETMD1-225ENST00000550715 NCOR2Q9Y618 2525 aa9.4□□□□□ -0.91
LETMD1-225ENST00000550715 GBF1Q92538 1859 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 CHD6Q8TD26 2715 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 ZFHX4Q86UP3 3567 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 PI4KAP2A4QPH2 592 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 ELL2O00472 640 aaPredicted RBP9.39□□□□□ -0.91
LETMD1-225ENST00000550715 WIPF1O43516 503 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 DCXO43602 365 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 LIG1P18858 919 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 CDK8P49336 464 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 HERVK_113P62684 666 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 ERVK-24P63145 666 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 ARID5AQ03989 594 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 TCF15Q12870 199 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 PPIGQ13427 754 aaKnown RBP eCLIP9.39□□□□□ -0.914e-9■■■■■ 35.5
LETMD1-225ENST00000550715 SF3A1Q15459 793 aaKnown RBP9.39□□□□□ -0.91
LETMD1-225ENST00000550715 PRAMEF19Q5SWL8 479 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 DTWD1Q8N5C7 304 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 PI4KAP1Q8N8J0 262 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 TBC1D22AQ8WUA7 517 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 NT5C1AQ9BXI3 368 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 USP40Q9NVE5 1235 aa9.39□□□□□ -0.91
LETMD1-225ENST00000550715 SMCHD1A6NHR9 2005 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 DDTLA6NHG4 134 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-225ENST00000550715 GNB5O14775 395 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 WISP1O95388 367 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 DLGAP3O95886 979 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-225ENST00000550715 IRX3P78415 501 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-225ENST00000550715 UBE4AQ14139 1066 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 SEZ6Q53EL9 994 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 KSR2Q6VAB6 950 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 LDHAL6AQ6ZMR3 332 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 RASGRP4Q8TDF6 673 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 GATAD2BQ8WXI9 593 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 WDR89Q96FK6 387 aaPredicted RBP9.38□□□□□ -0.91
LETMD1-225ENST00000550715 DRC1Q96MC2 740 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 MFSD14AQ96MC6 490 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 PAGR1Q9BTK6 254 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 GINM1Q9NU53 330 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 MKL2Q9ULH7 1088 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 EFR3BQ9Y2G0 817 aa9.38□□□□□ -0.91
LETMD1-225ENST00000550715 MAPK8IP3Q9UPT6 1336 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 FAM221AA4D161 298 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 DCDC2CA8MYV0 355 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 ZNF862O60290 1169 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 FRAT2O75474 233 aaPredicted RBP9.37□□□□□ -0.91
LETMD1-225ENST00000550715 SLC5A1P13866 664 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 IL9P15248 144 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 ATF4P18848 351 aaPredicted RBP9.37□□□□□ -0.91
LETMD1-225ENST00000550715 HOXA7P31268 230 aaPredicted RBP9.37□□□□□ -0.91
LETMD1-225ENST00000550715 RGS3P49796 1198 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 FOXO4P98177 505 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
LETMD1-225ENST00000550715 GCKRQ14397 625 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 RRP1BQ14684 758 aaKnown RBP9.37□□□□□ -0.91
LETMD1-225ENST00000550715 FAM47AQ5JRC9 791 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 ANKRD33Q7Z3H0 272 aa9.37□□□□□ -0.91
LETMD1-225ENST00000550715 FBXO11Q86XK2 927 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms