RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 TRIM11Q96F44 468 aa11.2□□□□□ -0.62
LRP6-205ENST00000540527 ORAI2Q96SN7 254 aa11.2□□□□□ -0.62
LRP6-205ENST00000540527 LRFN3Q9BTN0 628 aa11.2□□□□□ -0.62
LRP6-205ENST00000540527 KIAA1683Q9H0B3 1180 aa11.2□□□□□ -0.62
LRP6-205ENST00000540527 CHMP4BQ9H444 224 aaKnown RBP11.2□□□□□ -0.62
LRP6-205ENST00000540527 DCP1AQ9NPI6 582 aaPredicted RBP11.2□□□□□ -0.62
LRP6-205ENST00000540527 H2AFY2Q9P0M6 372 aaPredicted RBP11.2□□□□□ -0.62
LRP6-205ENST00000540527 XPO7Q9UIA9 1087 aaKnown RBP11.2□□□□□ -0.62
LRP6-205ENST00000540527 JAG2Q9Y219 1238 aa11.2□□□□□ -0.62
LRP6-205ENST00000540527 LOC102724428A0A0B4J2F2 783 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 PTPDC1A2A3K4 754 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 FOXN3O00409 490 aaPredicted RBP11.19□□□□□ -0.62
LRP6-205ENST00000540527 RGS13O14921 159 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 HOXC11O43248 304 aaPredicted RBP11.19□□□□□ -0.62
LRP6-205ENST00000540527 MAFO75444 373 aaPredicted RBP11.19□□□□□ -0.62
LRP6-205ENST00000540527 FGF18O76093 207 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 SCG5P05408 212 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 KCNA2P16389 499 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 PDCP20941 246 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 SIK1P57059 783 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 ZNF543Q08ER8 600 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 ADGRD1Q6QNK2 874 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 MILR1Q7Z6M3 343 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 ZC3H7AQ8IWR0 971 aaKnown RBP11.19□□□□□ -0.62
LRP6-205ENST00000540527 CEP57L1Q8IYX8 460 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 PRR18Q8N4B5 295 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
LRP6-205ENST00000540527 GPBAR1Q8TDU6 330 aa11.19□□□□□ -0.62
LRP6-205ENST00000540527 WNT7AO00755 349 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 CKMP06732 381 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 THP07101 528 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 ATP6V1B1P15313 513 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 YBX3P16989 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
LRP6-205ENST00000540527 ATF7P17544 494 aaPredicted RBP11.18□□□□□ -0.62
LRP6-205ENST00000540527 RPL17P18621 184 aaKnown RBP11.18□□□□□ -0.62
LRP6-205ENST00000540527 AGXTP21549 392 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 HTR1BP28222 390 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 KCNJ6P48051 423 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 PHC1P78364 1004 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 GALNT1Q10472 559 aaPredicted RBP11.18□□□□□ -0.62
LRP6-205ENST00000540527 FOXO1Q12778 655 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 MBTPS1Q14703 1052 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 ANKRD39Q53RE8 183 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 GTF2IRD2BQ6EKJ0 949 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 KRT74Q7RTS7 529 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 GTF2IRD2Q86UP8 949 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 VSIG1Q86XK7 387 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.18□□□□□ -0.62
LRP6-205ENST00000540527 ARHGEF39Q8N4T4 335 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 ANKRD52Q8NB46 1076 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 SIMC1Q8NDZ2 872 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 ZNF516Q92618 1163 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 CENPTQ96BT3 561 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 ACSBG1Q96GR2 724 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 PDRG1Q9NUG6 133 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 ABCF3Q9NUQ8 709 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 COQ6Q9Y2Z9 468 aa11.18□□□□□ -0.62
LRP6-205ENST00000540527 RRP7AQ9Y3A4 280 aaKnown RBP11.18□□□□□ -0.62
LRP6-205ENST00000540527 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 H7C0S8 307 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 DTNBO60941 627 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 PAPLNO95428 1278 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 PTPRAP18433 802 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 TUBP50607 506 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 PTPN14Q15678 1187 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 PGS1Q32NB8 556 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 ISM2Q6H9L7 571 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 RASGRP2Q7LDG7 609 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 CATSPER4Q7RTX7 472 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 ACSF2Q96CM8 615 aaPredicted RBP11.17□□□□□ -0.62
LRP6-205ENST00000540527 NSUN5Q96P11 429 aaKnown RBP11.17□□□□□ -0.62
LRP6-205ENST00000540527 ZFYVE21Q9BQ24 234 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 RASSF4Q9H2L5 321 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 ZWILCHQ9H900 591 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 NOC2LQ9Y3T9 749 aaKnown RBP11.17□□□□□ -0.62
LRP6-205ENST00000540527 ZNF451Q9Y4E5 1061 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 PCDHA11Q9Y5I1 949 aa11.17□□□□□ -0.62
LRP6-205ENST00000540527 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 PPEF1O14829 653 aaPredicted RBP11.16□□□□□ -0.62
LRP6-205ENST00000540527 CLEC3AO75596 197 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 SNRPB2P08579 225 aaKnown RBP11.16□□□□□ -0.62
LRP6-205ENST00000540527 MYF5P13349 255 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 CTSOP43234 321 aaPredicted RBP11.16□□□□□ -0.62
LRP6-205ENST00000540527 ZNF132P52740 706 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 YARSP54577 528 aaKnown RBP11.16□□□□□ -0.62
LRP6-205ENST00000540527 CDC16Q13042 620 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 ZACNQ401N2 412 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 FBXO47Q5MNV8 452 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 KCNT2Q6UVM3 1135 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 GALNT15Q8N3T1 639 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 MBIPQ9NS73 344 aa11.16□□□□□ -0.62
LRP6-205ENST00000540527 USP19O94966 1318 aa11.15□□□□□ -0.62
LRP6-205ENST00000540527 UBOX5O94941 541 aa11.15□□□□□ -0.62
LRP6-205ENST00000540527 KCNH1O95259 989 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms