RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 C6orf50Q9HD87 102 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 VPS54Q9P1Q0 977 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 KIAA1671Q9BY89 1806 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 CUL9Q8IWT3 2517 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 ABHD14A-ACY1A0A1B0GW23 586 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 LCHNA4D1U4 455 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 EPOPA6NHQ4 379 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 KIF28PB7ZC32 967 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 FAM86B1E9PN63 330 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 RFXAPO00287 272 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 MEIS1O00470 390 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 FAM86B2P0C5J1 330 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 ACTR2P61160 394 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 IGBP1P78318 339 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 TAP1Q03518 808 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 STK3Q13188 491 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
RAB40B-202ENST00000538809 PLA2G4DQ86XP0 818 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 DBF4BQ8NFT6 615 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 CRYGNQ8WXF5 182 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 ZBTB10Q96DT7 871 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 ZNF274Q96GC6 653 aaPredicted RBP17.05■□□□□ 0.32
RAB40B-202ENST00000538809 ZBED2Q9BTP6 218 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 SMARCAD1Q9H4L7 1026 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 PRDM6Q9NQX0 595 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
RAB40B-202ENST00000538809 CAND2O75155 1236 aa17.04■□□□□ 0.32
RAB40B-202ENST00000538809 ANAPC15P60006 121 aa17.04■□□□□ 0.32
RAB40B-202ENST00000538809 CCDC85BQ15834 202 aaPredicted RBP17.04■□□□□ 0.32
RAB40B-202ENST00000538809 PLEKHG4Q58EX7 1191 aa17.04■□□□□ 0.32
RAB40B-202ENST00000538809 MICALL1Q8N3F8 863 aa17.04■□□□□ 0.32
RAB40B-202ENST00000538809 CCDC148Q8NFR7 591 aa17.04■□□□□ 0.32
RAB40B-202ENST00000538809 TRPC6Q9Y210 931 aa17.04■□□□□ 0.32
RAB40B-202ENST00000538809 TCF20Q9UGU0 1960 aaKnown RBP17.04■□□□□ 0.32
RAB40B-202ENST00000538809 IGLV3-22A0A075B6J6 115 aa17.03■□□□□ 0.32
RAB40B-202ENST00000538809 CCNE2O96020 404 aa17.03■□□□□ 0.32
RAB40B-202ENST00000538809 NIPA1Q7RTP0 329 aa17.03■□□□□ 0.32
RAB40B-202ENST00000538809 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
RAB40B-202ENST00000538809 TRAPPC12Q8WVT3 735 aa17.03■□□□□ 0.32
RAB40B-202ENST00000538809 ARNTL2Q8WYA1 636 aa17.03■□□□□ 0.32
RAB40B-202ENST00000538809 SEPT8Q92599 483 aa17.03■□□□□ 0.32
RAB40B-202ENST00000538809 AZI2Q9H6S1 392 aa17.03■□□□□ 0.32
RAB40B-202ENST00000538809 PDRG1Q9NUG6 133 aa17.03■□□□□ 0.32
RAB40B-202ENST00000538809 EFCAB14O75071 495 aa17.02■□□□□ 0.32
RAB40B-202ENST00000538809 GJB5O95377 273 aa17.02■□□□□ 0.32
RAB40B-202ENST00000538809 CYP3A4P08684 503 aa17.02■□□□□ 0.32
RAB40B-202ENST00000538809 INSRRP14616 1297 aa17.02■□□□□ 0.32
RAB40B-202ENST00000538809 GNA11P29992 359 aa17.02■□□□□ 0.32
RAB40B-202ENST00000538809 MKRN4PQ13434 485 aaPredicted RBP17.02■□□□□ 0.32
RAB40B-202ENST00000538809 PLCB4Q15147 1175 aa17.02■□□□□ 0.32
RAB40B-202ENST00000538809 MARCH8Q5T0T0 291 aa17.02■□□□□ 0.32
RAB40B-202ENST00000538809 DNAJB3Q8WWF6 145 aa17.02■□□□□ 0.32
RAB40B-202ENST00000538809 FAM49AQ9H0Q0 323 aaPredicted RBP17.02■□□□□ 0.32
RAB40B-202ENST00000538809 TTC3P53804 2025 aa17.02■□□□□ 0.32
RAB40B-202ENST00000538809 MBLAC1A4D2B0 266 aaPredicted RBP17.01■□□□□ 0.31
RAB40B-202ENST00000538809 CPLX1O14810 134 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 CHRNA1P02708 482 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 AMHP03971 560 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 GHRP10912 638 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 STAT5BP51692 787 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 SSRP1Q08945 709 aaKnown RBP17.01■□□□□ 0.31
RAB40B-202ENST00000538809 MGAT3Q09327 533 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 FAM26DQ5JW98 314 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 KRT40Q6A162 431 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 TAF2Q6P1X5 1199 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 TRIM22Q8IYM9 498 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 BICD2Q8TD16 824 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 AIFM3Q96NN9 605 aa17.01■□□□□ 0.31
RAB40B-202ENST00000538809 COL25A1Q9BXS0 654 aaPredicted RBP17.01■□□□□ 0.31
RAB40B-202ENST00000538809 IPO5O00410 1097 aaKnown RBP17■□□□□ 0.31
RAB40B-202ENST00000538809 BACH1O14867 736 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 DHX15O43143 795 aaKnown RBP17■□□□□ 0.31
RAB40B-202ENST00000538809 DTNBO60941 627 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 SEC24BO95487 1268 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 NLRP5P59047 1200 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
RAB40B-202ENST00000538809 PRR16Q569H4 304 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 MCTP2Q6DN12 878 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 CCDC60Q8IWA6 550 aaPredicted RBP17■□□□□ 0.31
RAB40B-202ENST00000538809 GDPD5Q8WTR4 605 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 ZNF577Q9BSK1 485 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 IFIH1Q9BYX4 1025 aaKnown RBP17■□□□□ 0.31
RAB40B-202ENST00000538809 SH3GLB2Q9NR46 395 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 MTUS1Q9ULD2 1270 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 CDY2AQ9Y6F7 541 aa17■□□□□ 0.31
RAB40B-202ENST00000538809 POTEB3A0JP26 581 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 LINC01553A4QN01 128 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 RRN3P2A6NIE6 340 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 EDIL3O43854 480 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 ATG7O95352 703 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 SCRN1Q12765 414 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 POTEBQ6S5H4 581 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 ABHD15Q6UXT9 468 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 PLPPR4Q7Z2D5 763 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 RPAINQ86UA6 219 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 RSPH3Q86UC2 560 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 RAD9AQ99638 391 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 TPCN1Q9ULQ1 816 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 VCANP13611 3396 aa16.99■□□□□ 0.31
RAB40B-202ENST00000538809 BRWD1Q9NSI6 2320 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms