RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 DPH5Q9H2P9 285 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 RXFP1Q9HBX9 757 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 FAM114A2Q9NRY5 505 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 FBXO2Q9UK22 296 aaPredicted RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 STK24Q9Y6E0 443 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.05
PTPRK-219ENST00000531050 H0Y3Z8 333 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 SKIP12755 728 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 SMARCA1P28370 1054 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 HOXA10P31260 410 aaPredicted RBP8.46□□□□□ -1.05
PTPRK-219ENST00000531050 OCRLQ01968 901 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 LMNB2Q03252 620 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 TSR1Q2NL82 804 aaKnown RBP8.46□□□□□ -1.05
PTPRK-219ENST00000531050 SYDE2Q5VT97 1194 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 OLFML2BQ68BL8 750 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 PROSER2Q86WR7 435 aaPredicted RBP8.46□□□□□ -1.05
PTPRK-219ENST00000531050 CYP4X1Q8N118 509 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 MB21D1Q8N884 522 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 DEPTORQ8TB45 409 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 NEK9Q8TD19 979 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 UBLCP1Q8WVY7 318 aaPredicted RBP8.46□□□□□ -1.05
PTPRK-219ENST00000531050 NELFBQ8WX92 580 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 SETDB2Q96T68 719 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 NSRP1Q9H0G5 558 aaKnown RBP8.46□□□□□ -1.05
PTPRK-219ENST00000531050 ETNK1Q9HBU6 452 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 LUC7LQ9NQ29 371 aaKnown RBP8.46□□□□□ -1.05
PTPRK-219ENST00000531050 SUCLA2Q9P2R7 463 aaPredicted RBP8.46□□□□□ -1.05
PTPRK-219ENST00000531050 ZNF180Q9UJW8 692 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 USP20Q9Y2K6 914 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 SPO11Q9Y5K1 396 aa8.46□□□□□ -1.05
PTPRK-219ENST00000531050 BOLA2-SMG1P6H3BVE0 249 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 P4HA2O15460 535 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 NDUFB5O43674 189 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 UNC5CO95185 931 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 AFPP02771 609 aaKnown RBP8.46□□□□□ -1.06
PTPRK-219ENST00000531050 PYGMP11217 842 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 VHLP40337 213 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 SPAG1Q07617 926 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 RBM26Q5T8P6 1007 aaKnown RBP8.46□□□□□ -1.06
PTPRK-219ENST00000531050 KANK3Q6NY19 840 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 USP49Q70CQ1 688 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 ZC3H18Q86VM9 953 aaKnown RBP8.46□□□□□ -1.06
PTPRK-219ENST00000531050 DDX42Q86XP3 938 aaKnown RBP eCLIP8.46□□□□□ -1.06
PTPRK-219ENST00000531050 FBXL16Q8N461 479 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 TBC1D16Q8TBP0 767 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 SH3TC2Q8TF17 1288 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 NRG4Q8WWG1 115 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 IRGQQ8WZA9 623 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 CLIP3Q96DZ5 547 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 SMC6Q96SB8 1091 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 DDX50Q9BQ39 737 aaKnown RBP8.46□□□□□ -1.06
PTPRK-219ENST00000531050 SELENOSQ9BQE4 189 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 TTYH3Q9C0H2 523 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 MIS12Q9H081 205 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 PFDN4Q9NQP4 134 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 AGPAT5Q9NUQ2 364 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 KIAA1522Q9P206 1035 aaPredicted RBP8.46□□□□□ -1.06
PTPRK-219ENST00000531050 RNF14Q9UBS8 474 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 SALL4Q9UJQ4 1053 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 CROTQ9UKG9 612 aa8.46□□□□□ -1.06
PTPRK-219ENST00000531050 A0A1W2PQC6 194 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 MAGEB3O15480 346 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 PTPREP23469 700 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 HOXD11P31277 338 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-219ENST00000531050 PDE6CP51160 858 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 CLCN2P51788 898 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 MTTPP55157 894 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 SH3BGRP55822 239 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-219ENST00000531050 TEFQ10587 303 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 MTMR3Q13615 1198 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 CUL1Q13616 776 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 MAP7D1Q3KQU3 841 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 KLHDC7AQ5VTJ3 777 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 KRT40Q6A162 431 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 TRIM50Q86XT4 487 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 SAMD3Q8N6K7 520 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 ZNF507Q8TCN5 953 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 NAT14Q8WUY8 206 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 CCDC28BQ9BUN5 200 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 LRMDAQ9H2I8 198 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 TMEM94Q12767 1356 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 A6NJR5 290 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-219ENST00000531050 LGALS16A8MUM7 142 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-219ENST00000531050 O00370 1275 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 RGL2O15211 777 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 ECE2O60344 883 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 ENTPD5O75356 428 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 SUN1O94901 812 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 LYNP07948 512 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 UBTFL6P0CB48 400 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-219ENST00000531050 VAV1P15498 845 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 XBP1P17861 261 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 MCMDC2Q4G0Z9 681 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 WASHC2DQ5SRD0 308 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 THOC7Q6I9Y2 204 aaKnown RBP8.45□□□□□ -1.06
PTPRK-219ENST00000531050 TMC3Q7Z5M5 1100 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 SH3RF1Q7Z6J0 888 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms