RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 C1orf141Q5JVX7 400 aa5.08□□□□□ -1.6
C11orf54-208ENST00000530279 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.08□□□□□ -1.6
C11orf54-208ENST00000530279 CARFQ8N187 725 aa5.08□□□□□ -1.6
C11orf54-208ENST00000530279 GINM1Q9NU53 330 aa5.08□□□□□ -1.6
C11orf54-208ENST00000530279 PRKAG3Q9UGI9 489 aa5.08□□□□□ -1.6
C11orf54-208ENST00000530279 TLR6Q9Y2C9 796 aa5.08□□□□□ -1.6
C11orf54-208ENST00000530279 SBF2Q86WG5 1849 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 PKD1L3Q7Z443 1732 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 TNS1Q9HBL0 1735 aaKnown RBP5.07□□□□□ -1.6
C11orf54-208ENST00000530279 SHISA3A0PJX4 238 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 TFE3P19532 575 aaPredicted RBP5.07□□□□□ -1.6
C11orf54-208ENST00000530279 EIF6P56537 245 aaKnown RBP5.07□□□□□ -1.6
C11orf54-208ENST00000530279 SLC15A2Q16348 729 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 ZNF530Q6P9A1 599 aaPredicted RBP5.07□□□□□ -1.6
C11orf54-208ENST00000530279 GALNT18Q6P9A2 607 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 USHBP1Q8N6Y0 703 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 STK32BQ9NY57 414 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 TMOD3Q9NYL9 352 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 NHSQ6T4R5 1651 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 SRCAPQ6ZRS2 3230 aa5.07□□□□□ -1.6
C11orf54-208ENST00000530279 COL3A1P02461 1466 aaPredicted RBP5.07□□□□□ -1.6
C11orf54-208ENST00000530279 MYBBP1AQ9BQG0 1328 aaKnown RBP5.06□□□□□ -1.6
C11orf54-208ENST00000530279 PGRP06401 933 aa5.06□□□□□ -1.6
C11orf54-208ENST00000530279 ATXN1P54253 815 aaKnown RBP5.06□□□□□ -1.6
C11orf54-208ENST00000530279 HTRA3P83110 453 aa5.06□□□□□ -1.6
C11orf54-208ENST00000530279 PURAQ00577 322 aaKnown RBP5.06□□□□□ -1.6
C11orf54-208ENST00000530279 DDX10Q13206 875 aaKnown RBP5.06□□□□□ -1.6
C11orf54-208ENST00000530279 KIR3DS1Q14943 382 aa5.06□□□□□ -1.6
C11orf54-208ENST00000530279 SEZ6Q53EL9 994 aa5.06□□□□□ -1.6
C11orf54-208ENST00000530279 RNF141Q8WVD5 230 aa5.06□□□□□ -1.6
C11orf54-208ENST00000530279 PIGBQ92521 554 aa5.06□□□□□ -1.6
C11orf54-208ENST00000530279 CDK5RAP1Q96SZ6 601 aaKnown RBP5.06□□□□□ -1.6
C11orf54-208ENST00000530279 ZNF408Q9H9D4 720 aa5.06□□□□□ -1.6
C11orf54-208ENST00000530279 UBP1Q9NZI7 540 aa5.06□□□□□ -1.6
C11orf54-208ENST00000530279 SLC12A7Q9Y666 1083 aa5.06□□□□□ -1.6
C11orf54-208ENST00000530279 PALLDQ8WX93 1383 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 LTBP3Q9NS15 1303 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 U2AF1L5P0DN76 240 aaPredicted RBP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 GARTP22102 1010 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 ZNF200P98182 395 aaPredicted RBP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 U2AF1Q01081 240 aaKnown RBP eCLIP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 RPL6Q02878 288 aaKnown RBP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 PDE4BQ07343 736 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 RAB33AQ14088 237 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 FBXW10Q5XX13 1052 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 ZC3H14Q6PJT7 736 aaKnown RBP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 RPTNQ6XPR3 784 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 ANKS3Q6ZW76 656 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 PTF1AQ7RTS3 328 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 REC114Q7Z4M0 266 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 MCATQ8IVS2 390 aaKnown RBP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 JARID2Q92833 1246 aaPredicted RBP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 ANAPC16Q96DE5 110 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 TEX13AQ9BXU3 409 aaPredicted RBP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 MTFR1LQ9H019 292 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 PRKRIP1Q9H875 184 aaPredicted RBP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 SLC52A2Q9HAB3 445 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 SPON1Q9HCB6 807 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 BABAM1Q9NWV8 329 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 CCNL1Q9UK58 526 aaPredicted RBP5.05□□□□□ -1.6
C11orf54-208ENST00000530279 RREB1Q92766 1687 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 PCSK5Q92824 1860 aa5.05□□□□□ -1.6
C11orf54-208ENST00000530279 CEMIPQ8WUJ3 1361 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 WTIPA6NIX2 430 aaPredicted RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 F6X3S4 739 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 RNMTO43148 476 aaKnown RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 F13A1P00488 732 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 CYP4F8P98187 520 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 DLX2Q07687 328 aaPredicted RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 FHL2Q14192 279 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 BMS1Q14692 1282 aaKnown RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 R3HDM1Q15032 1099 aaKnown RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 MTHFSDQ2M296 383 aaKnown RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 GIMAP6Q6P9H5 292 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 PNISRQ8TF01 805 aaKnown RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 GAL3ST3Q96A11 431 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 SRPK1Q96SB4 655 aaKnown RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 SSBP3Q9BWW4 388 aaPredicted RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 TNFRSF12AQ9NP84 129 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 TAF6LQ9Y6J9 622 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 KDM6AO15550 1401 aaPredicted RBP5.04□□□□□ -1.6
C11orf54-208ENST00000530279 RGPD2P0DJD1 1756 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 MAP3K5Q99683 1374 aa5.04□□□□□ -1.6
C11orf54-208ENST00000530279 SHANK3Q9BYB0 1731 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 ZNF831Q5JPB2 1677 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 MRC1P22897 1456 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 BTAF1O14981 1849 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 FAM221AA4D161 298 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 ANKRD62A6NC57 917 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 GFRA2O00451 464 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 HMOX1P09601 288 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 PRKAR2BP31323 418 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 GIPRP48546 466 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 MAPKAPK2P49137 400 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 MVKQ03426 396 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 LMOD3Q0VAK6 560 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 TEFQ10587 303 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 IFRD2Q12894 506 aaPredicted RBP5.03□□□□□ -1.6
C11orf54-208ENST00000530279 FXNQ16595 210 aa5.03□□□□□ -1.6
C11orf54-208ENST00000530279 PLEKHN1Q494U1 663 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms