RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 TACC3Q9Y6A5 838 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 COL12A1Q99715 3063 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 ATG2AQ2TAZ0 1938 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 TMEM221A6NGB7 291 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 LINC01387J3KSC0 135 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 M0R296 226 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 SNAP23O00161 211 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 ENC1O14682 589 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 FSCN2O14926 492 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 PTMAP06454 111 aaKnown RBP6.33□□□□□ -1.4
PABPC1-223ENST00000523636 CSF2RAP15509 400 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 ADCYAP1R1P41586 468 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 RPS26P62854 115 aaKnown RBP6.33□□□□□ -1.4
PABPC1-223ENST00000523636 C19orf57Q0VDD7 668 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 GRB10Q13322 594 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 AP3B2Q13367 1082 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 TNFAIP1Q13829 316 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 SETDB1Q15047 1291 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 NOL9Q5SY16 702 aaKnown RBP6.33□□□□□ -1.4
PABPC1-223ENST00000523636 MIGA2Q7L4E1 593 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 DMRTC2Q8IXT2 367 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-223ENST00000523636 EDAQ92838 391 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 SECISBP2LQ93073 1101 aaKnown RBP6.33□□□□□ -1.4
PABPC1-223ENST00000523636 ISCA1Q9BUE6 129 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-223ENST00000523636 GPN3Q9UHW5 284 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-223ENST00000523636 TBX21Q9UL17 535 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 JAG2Q9Y219 1238 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 NOP58Q9Y2X3 529 aaKnown RBP6.33□□□□□ -1.4
PABPC1-223ENST00000523636 AFG3L2Q9Y4W6 797 aa6.33□□□□□ -1.4
PABPC1-223ENST00000523636 CNOT1A5YKK6 2376 aaKnown RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 PIEZO2Q9H5I5 2752 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 ZNF521Q96K83 1311 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 IRS4O14654 1257 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 TM4SF5O14894 197 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 TIMP1P01033 207 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 ZKSCAN1P17029 563 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 IBSPP21815 317 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 KCNA5P22460 613 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 EIF4A1P60842 406 aaKnown RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 RAC1P63000 192 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 SNRPNP63162 240 aaKnown RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 PUM1Q14671 1186 aaKnown RBP eCLIP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 TCEAL1Q15170 157 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 C4orf46Q504U0 113 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 ERICH6BQ5W0A0 696 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 ANO1Q5XXA6 986 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 SCARA3Q6AZY7 606 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 MFSD5Q6N075 450 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 GADL1Q6ZQY3 521 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 COPS6Q7L5N1 327 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 FRMD5Q7Z6J6 570 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 CCDC146Q8IYE0 955 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 DZIP1LQ8IYY4 767 aaKnown RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 FBXL6Q8N531 539 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 BEND7Q8N7W2 519 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 SMCR8Q8TEV9 937 aaPredicted RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 TRIM11Q96F44 468 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 CD209Q9NNX6 404 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 NOP53Q9NZM5 478 aaKnown RBP6.32□□□□□ -1.4
PABPC1-223ENST00000523636 KCNG1Q9UIX4 513 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 DOCK1Q14185 1865 aa6.32□□□□□ -1.4
PABPC1-223ENST00000523636 MYH3P11055 1940 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 DLG5Q8TDM6 1919 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 FAM181BA6NEQ2 426 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 CCER2I3L3R5 266 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 FBXO24O75426 580 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 CYP11A1P05108 521 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 CELA3AP09093 270 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 SLC5A1P13866 664 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 NME2P22392 152 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 AVPR2P30518 371 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 SUZ12Q15022 739 aaKnown RBP6.31□□□□□ -1.4
PABPC1-223ENST00000523636 PLEKHG6Q3KR16 790 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 CCDC84Q86UT8 332 aaPredicted RBP6.31□□□□□ -1.4
PABPC1-223ENST00000523636 FBXO11Q86XK2 927 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 NT5DC4Q86YG4 428 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 NEK9Q8TD19 979 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 EMILIN2Q9BXX0 1053 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 BRINP2Q9C0B6 783 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 TXNRD2Q9NNW7 524 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 MORF4L1Q9UBU8 362 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 GGT7Q9UJ14 662 aa6.31□□□□□ -1.4
PABPC1-223ENST00000523636 UTYO14607 1347 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 COL4A3Q01955 1670 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 A0A0A0MRY4 1105 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 PQBP1O60828 265 aaKnown RBP6.3□□□□□ -1.4
PABPC1-223ENST00000523636 DEAF1O75398 565 aaPredicted RBP6.3□□□□□ -1.4
PABPC1-223ENST00000523636 CA3P07451 260 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 RBM5P52756 815 aaKnown RBP eCLIP6.3□□□□□ -1.42e-12■■■■□ 23.8
PABPC1-223ENST00000523636 FKBP1AP62942 108 aaKnown RBP6.3□□□□□ -1.4
PABPC1-223ENST00000523636 RAD51AP2Q09MP3 1159 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 LRRC14Q15048 493 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 LRRC41Q15345 812 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 HSP90AB3PQ58FF7 597 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 FASTKD5Q7L8L6 764 aaKnown RBP6.3□□□□□ -1.4
PABPC1-223ENST00000523636 RELL1Q8IUW5 271 aa6.3□□□□□ -1.4
PABPC1-223ENST00000523636 FMR1NBQ8N0W7 255 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms