RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 RASSF3Q86WH2 238 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 TMEM151BQ8IW70 566 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 CCAR2Q8N163 923 aaKnown RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 ZGPATQ8N5A5 531 aaKnown RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 CERS5Q8N5B7 392 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 ZNF713Q8N859 430 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 VGLL2Q8N8G2 317 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 MAGEC3Q8TD91 643 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 AFAP1L1Q8TED9 768 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 SGCDQ92629 289 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 RABGGTAQ92696 567 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 SDCCAG3Q96C92 435 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 FAM84BQ96KN1 310 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 PCMTD1Q96MG8 357 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 MXD3Q9BW11 206 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 NSRP1Q9H0G5 558 aaKnown RBP8.29□□□□□ -1.08
HDAC3-216ENST00000523088 KIF9Q9HAQ2 790 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 ARNT2Q9HBZ2 717 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 CYLDQ9NQC7 956 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 FKBP14Q9NWM8 211 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 FBXL5Q9UKA1 691 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 MAPK8IP1Q9UQF2 711 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 PCDHGC5Q9Y5F6 944 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 AK9Q5TCS8 1911 aa8.29□□□□□ -1.08
HDAC3-216ENST00000523088 OTOFQ9HC10 1997 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 NDUFAB1O14561 156 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 ZBTB39O15060 712 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 TRPA1O75762 1119 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 MBD4O95243 580 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 ACTN2P35609 894 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 GYG1P46976 350 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 TM4SF4P48230 202 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 CLCN2P51788 898 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 CDK17Q00537 523 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 SP140Q13342 867 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 SNX1Q13596 522 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 GRAMD1BQ3KR37 738 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 SPDYE2Q495Y8 402 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 FKBP1CQ5VVH2 108 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 OTUD7BQ6GQQ9 843 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 SLC30A9Q6PML9 568 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 DSTYKQ6XUX3 929 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 ITPRIPQ8IWB1 547 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 ZBTB8BQ8NAP8 495 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-216ENST00000523088 USP38Q8NB14 1042 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 GALNT6Q8NCL4 622 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 CDCA7LQ96GN5 454 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 ABHD8Q96I13 439 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 TCF12Q99081 682 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 CGREF1Q99674 301 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 OSBPL3Q9H4L5 887 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 CLK4Q9HAZ1 481 aaKnown RBP8.28□□□□□ -1.08
HDAC3-216ENST00000523088 RNF186Q9NXI6 227 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 LCMT1Q9UIC8 334 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 INTUQ9ULD6 942 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 NOB1Q9ULX3 412 aaKnown RBP8.28□□□□□ -1.08
HDAC3-216ENST00000523088 ANGEL1Q9UNK9 670 aaKnown RBP8.28□□□□□ -1.08
HDAC3-216ENST00000523088 ZNF148Q9UQR1 794 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 TRIM17Q9Y577 477 aa8.28□□□□□ -1.08
HDAC3-216ENST00000523088 F8W031 263 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 SNAP23O00161 211 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 LIN7AO14910 233 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 ERLIN2O94905 339 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 GZMAP12544 262 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 FGFR2P21802 821 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 HOXD11P31277 338 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 HPDP32754 393 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 CRKP46108 304 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 BLVRAP53004 296 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 RARSP54136 660 aaKnown RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 GJA9P57773 515 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 ZNF445P59923 1031 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 GABREP78334 506 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 KRT83P78385 493 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 NCBP1Q09161 790 aaKnown RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 KIF5AQ12840 1032 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 LDLRAD1Q5T700 205 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 INTS3Q68E01 1043 aaKnown RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 PPP4R4Q6NUP7 873 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 HHIPL2Q6UWX4 724 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 ARHGEF18Q6ZSZ5 1173 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 NANOGNBQ7Z5D8 188 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 FAM83AQ86UY5 434 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 CCDC13Q8IYE1 715 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 RNF10Q8N5U6 811 aaKnown RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 TRIML2Q8N7C3 387 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 SKA1Q96BD8 255 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 ZDHHC15Q96MV8 337 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 ALPK1Q96QP1 1244 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 CSRNP1Q96S65 589 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 EIF2AQ9BY44 585 aaKnown RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 PUS3Q9BZE2 481 aaKnown RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 FANCFQ9NPI8 374 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 GPR108Q9NPR9 543 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 CD93Q9NPY3 652 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 COPRSQ9NQ92 184 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 PNMA8BQ9ULN7 279 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-216ENST00000523088 GTF2A1LQ9UNN4 478 aa8.27□□□□□ -1.09
HDAC3-216ENST00000523088 PHF24Q9UPV7 400 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms