RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 FRMPD4Q14CM0 1322 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 SIP14410 1827 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 GPR37L1O60883 481 aa20.73■□□□□ 0.91
TFF3-204ENST00000518498 CTSHP09668 335 aa20.73■□□□□ 0.91
TFF3-204ENST00000518498 KCNA5P22460 613 aa20.73■□□□□ 0.91
TFF3-204ENST00000518498 GNAQP50148 359 aa20.73■□□□□ 0.91
TFF3-204ENST00000518498 SCRN1Q12765 414 aa20.73■□□□□ 0.91
TFF3-204ENST00000518498 UTP14CQ5TAP6 766 aaKnown RBP20.73■□□□□ 0.91
TFF3-204ENST00000518498 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.73■□□□□ 0.91
TFF3-204ENST00000518498 CUL5Q93034 780 aa20.73■□□□□ 0.91
TFF3-204ENST00000518498 OSBPL7Q9BZF2 842 aa20.73■□□□□ 0.91
TFF3-204ENST00000518498 CD320Q9NPF0 282 aa20.73■□□□□ 0.91
TFF3-204ENST00000518498 ZNF215Q9UL58 517 aaPredicted RBP20.73■□□□□ 0.91
TFF3-204ENST00000518498 ARIH1Q9Y4X5 557 aaPredicted RBP20.73■□□□□ 0.91
TFF3-204ENST00000518498 PI4K2BG5E9Z4 385 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 H3BNC9 293 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 CCT2P78371 535 aaKnown RBP20.72■□□□□ 0.91
TFF3-204ENST00000518498 SEMA3FQ13275 785 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 GPM6BQ13491 265 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 FAM26DQ5JW98 314 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 XRRA1Q6P2D8 792 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 NECAB1Q8N987 351 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 APBB2Q92870 758 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 RRP36Q96EU6 259 aaKnown RBP20.72■□□□□ 0.91
TFF3-204ENST00000518498 SENP7Q9BQF6 1050 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 HCN4Q9Y3Q4 1203 aa20.72■□□□□ 0.91
TFF3-204ENST00000518498 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.71■□□□□ 0.91
TFF3-204ENST00000518498 ADAM17P78536 824 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 ARHGAP4P98171 946 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 PCNX4Q63HM2 1172 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 USP17L6PQ6QN14 398 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 NLRX1Q86UT6 975 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 FAM178BQ8IXR5 827 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 TMEM192Q8IY95 271 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 GIMAP8Q8ND71 665 aaPredicted RBP20.71■□□□□ 0.91
TFF3-204ENST00000518498 LZTS2Q9BRK4 669 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 MYL10Q9BUA6 226 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 KIF3AQ9Y496 699 aa20.71■□□□□ 0.91
TFF3-204ENST00000518498 SMARCA1P28370 1054 aa20.7■□□□□ 0.9
TFF3-204ENST00000518498 HMGN5P82970 282 aaKnown RBP20.7■□□□□ 0.9
TFF3-204ENST00000518498 SP4Q02446 784 aa20.7■□□□□ 0.9
TFF3-204ENST00000518498 PUS10Q3MIT2 529 aaKnown RBP20.7■□□□□ 0.9
TFF3-204ENST00000518498 PTCRAQ6ISU1 281 aaPredicted RBP20.7■□□□□ 0.9
TFF3-204ENST00000518498 TRIM50Q86XT4 487 aa20.7■□□□□ 0.9
TFF3-204ENST00000518498 GJD3Q8N144 294 aa20.7■□□□□ 0.9
TFF3-204ENST00000518498 BANK1Q8NDB2 785 aa20.7■□□□□ 0.9
TFF3-204ENST00000518498 IFIH1Q9BYX4 1025 aaKnown RBP20.7■□□□□ 0.9
TFF3-204ENST00000518498 SMC3Q9UQE7 1217 aa20.7■□□□□ 0.9
TFF3-204ENST00000518498 TELO2Q9Y4R8 837 aa20.7■□□□□ 0.9
TFF3-204ENST00000518498 NRCAMQ92823 1304 aa20.7■□□□□ 0.9
TFF3-204ENST00000518498 NCOR1O75376 2440 aa20.69■□□□□ 0.9
TFF3-204ENST00000518498 PIK3CDO00329 1044 aa20.69■□□□□ 0.9
TFF3-204ENST00000518498 MEIS2O14770 477 aa20.69■□□□□ 0.9
TFF3-204ENST00000518498 RXRAP19793 462 aa20.69■□□□□ 0.9
TFF3-204ENST00000518498 TIGD5Q53EQ6 642 aa20.69■□□□□ 0.9
TFF3-204ENST00000518498 LMBR1Q8WVP7 490 aa20.69■□□□□ 0.9
TFF3-204ENST00000518498 SPZ1Q9BXG8 430 aa20.69■□□□□ 0.9
TFF3-204ENST00000518498 NCOA5Q9HCD5 579 aaKnown RBP20.69■□□□□ 0.9
TFF3-204ENST00000518498 MICAL3Q7RTP6 2002 aa20.69■□□□□ 0.9
TFF3-204ENST00000518498 GRXCR2A6NFK2 248 aa20.68■□□□□ 0.9
TFF3-204ENST00000518498 CHRNA1P02708 482 aa20.68■□□□□ 0.9
TFF3-204ENST00000518498 IL9P15248 144 aa20.68■□□□□ 0.9
TFF3-204ENST00000518498 IFNAR1P17181 557 aa20.68■□□□□ 0.9
TFF3-204ENST00000518498 ST3GAL1Q11201 340 aa20.68■□□□□ 0.9
TFF3-204ENST00000518498 RAB11FIP4Q86YS3 637 aa20.68■□□□□ 0.9
TFF3-204ENST00000518498 FIBCD1Q8N539 461 aa20.68■□□□□ 0.9
TFF3-204ENST00000518498 NEK9Q8TD19 979 aa20.68■□□□□ 0.9
TFF3-204ENST00000518498 C11orf16Q9NQ32 467 aa20.68■□□□□ 0.9
TFF3-204ENST00000518498 SEC63Q9UGP8 760 aaKnown RBP20.68■□□□□ 0.9
TFF3-204ENST00000518498 BAZ2BQ9UIF8 2168 aaKnown RBP20.68■□□□□ 0.9
TFF3-204ENST00000518498 FAM86C2PA6NEL3 165 aa20.67■□□□□ 0.9
TFF3-204ENST00000518498 PDIA4P13667 645 aaKnown RBP20.67■□□□□ 0.9
TFF3-204ENST00000518498 CDC27P30260 824 aa20.67■□□□□ 0.9
TFF3-204ENST00000518498 SSTR3P32745 418 aaPredicted RBP20.67■□□□□ 0.9
TFF3-204ENST00000518498 ADD1P35611 737 aaKnown RBP20.67■□□□□ 0.9
TFF3-204ENST00000518498 TCF7P36402 384 aaPredicted RBP20.67■□□□□ 0.9
TFF3-204ENST00000518498 RPAINQ86UA6 219 aa20.67■□□□□ 0.9
TFF3-204ENST00000518498 TRIM22Q8IYM9 498 aa20.67■□□□□ 0.9
TFF3-204ENST00000518498 FAM217BQ9NTX9 383 aaPredicted RBP20.67■□□□□ 0.9
TFF3-204ENST00000518498 ATP9AO75110 1047 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 TCEAL5Q5H9L2 206 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 TAF2Q6P1X5 1199 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 EP400NLQ6ZTU2 488 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 TMTC3Q6ZXV5 915 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 RSPH3Q86UC2 560 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 NSUN7Q8NE18 718 aaKnown RBP20.66■□□□□ 0.9
TFF3-204ENST00000518498 SEPT1Q8WYJ6 367 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 GPRASP2Q96D09 838 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 PABPC5Q96DU9 382 aaKnown RBP20.66■□□□□ 0.9
TFF3-204ENST00000518498 CDHR1Q96JP9 859 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 NSUN3Q9H649 340 aaKnown RBP20.66■□□□□ 0.9
TFF3-204ENST00000518498 PSTPIP2Q9H939 334 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 EHMT1Q9H9B1 1298 aa20.66■□□□□ 0.9
TFF3-204ENST00000518498 STK36Q9NRP7 1315 aa20.65■□□□□ 0.9
TFF3-204ENST00000518498 H3BQ06 376 aaPredicted RBP20.65■□□□□ 0.9
TFF3-204ENST00000518498 RB1P06400 928 aa20.65■□□□□ 0.9
TFF3-204ENST00000518498 AKAP17AQ02040 695 aaKnown RBP20.65■□□□□ 0.9
TFF3-204ENST00000518498 SSRP1Q08945 709 aaKnown RBP20.65■□□□□ 0.9
TFF3-204ENST00000518498 RUFY4Q6ZNE9 571 aa20.65■□□□□ 0.9
TFF3-204ENST00000518498 SPRYD3Q8NCJ5 442 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms