RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 GSTO1P78417 241 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 CETN1Q12798 172 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 RFTN1Q14699 578 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-208ENST00000514335 PSMD6Q15008 389 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 PPP1R15BQ5SWA1 713 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 PRPF38BQ5VTL8 546 aaKnown RBP7.89□□□□□ -1.15
NIPBL-208ENST00000514335 CRTC1Q6UUV9 634 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 LRSAM1Q6UWE0 723 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 TPTE2Q6XPS3 522 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 MFSD6Q6ZSS7 791 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 IL17RDQ8NFM7 739 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 SPATA18Q8TC71 538 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 SLC7A3Q8WY07 619 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 INTS12Q96CB8 462 aaKnown RBP7.89□□□□□ -1.15
NIPBL-208ENST00000514335 TIFAQ96CG3 184 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF112Q9UJU3 913 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 SMNDC1O75940 238 aaKnown RBP eCLIP7.89□□□□□ -1.15
NIPBL-208ENST00000514335 GBP2P32456 591 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-208ENST00000514335 ATP6V1E1P36543 226 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 CTCFP49711 727 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-208ENST00000514335 PTPN5P54829 565 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 KDSRQ06136 332 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 RBL2Q08999 1139 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 RALGDSQ12967 914 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 SGCGQ13326 291 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 CCDC57Q2TAC2 916 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 EXOC3L1Q86VI1 746 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 HID1Q8IV36 788 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 CCDC83Q8IWF9 413 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 OR6C4Q8NGE1 309 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 PPP2R3CQ969Q6 453 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 C7orf25Q9BPX7 421 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 UBXN6Q9BZV1 441 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 CRLF2Q9HC73 371 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 KCND1Q9NSA2 647 aa7.89□□□□□ -1.15
NIPBL-208ENST00000514335 ADGRB1O14514 1584 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 ENPP3O14638 875 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 STRNO43815 780 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 LGR5O75473 907 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 CD2BP2O95400 341 aaKnown RBP7.88□□□□□ -1.15
NIPBL-208ENST00000514335 S100A6P06703 90 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 HADHAP40939 763 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 PPP1R2P41236 205 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 ACADSBP45954 432 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 RENBPP51606 427 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 ZNF445P59923 1031 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 APBA1Q02410 837 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 FUT2Q10981 343 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 PLCB4Q15147 1175 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 PUM3Q15397 648 aaKnown RBP7.88□□□□□ -1.15
NIPBL-208ENST00000514335 CEP78Q5JTW2 689 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 HABP4Q5JVS0 413 aaKnown RBP7.88□□□□□ -1.15
NIPBL-208ENST00000514335 C6orf183Q5T699 404 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 PPP1R2P3Q6NXS1 205 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 CCDC170Q8IYT3 715 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 SMC1BQ8NDV3 1235 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 GMCL1Q96IK5 515 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 CMTM3Q96MX0 182 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 ACAP3Q96P50 834 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 FAM129AQ9BZQ8 928 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 MOSPD1Q9UJG1 213 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 DSEQ9UL01 958 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 PNMA8BQ9ULN7 279 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-208ENST00000514335 GTF2A1LQ9UNN4 478 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 ANGPTL3Q9Y5C1 460 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 COL18A1P39060 1754 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 C17orf113A0A1B0GUU1 675 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 SPTLC1O15269 473 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 MTSS1O43312 755 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 TACC1O75410 805 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 TMCC1O94876 653 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 SNX4O95219 450 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 TMEM11P17152 192 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 KRT20P35900 424 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 CAP2P40123 477 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 PFKPQ01813 784 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 ACTN3Q08043 901 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-208ENST00000514335 TTF1Q15361 905 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-208ENST00000514335 C15orf59Q2T9L4 293 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-208ENST00000514335 LETM2Q2VYF4 491 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 METTL24Q5JXM2 366 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 C1orf228Q6PIY5 440 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 MAMDC2Q7Z304 686 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-208ENST00000514335 GPIHBP1Q8IV16 184 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 UNC5CLQ8IV45 518 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 DYDC1Q8WWB3 177 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 NDEL1Q9GZM8 345 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 ATP13A3Q9H7F0 1226 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 SCPEP1Q9HB40 452 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 MTRF1LQ9UGC7 380 aaKnown RBP7.88□□□□□ -1.15
NIPBL-208ENST00000514335 SH3GLB1Q9Y371 365 aa7.88□□□□□ -1.15
NIPBL-208ENST00000514335 SPATA31A3Q5VYP0 1347 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 MAPK8IP3Q9UPT6 1336 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 PSDA5PKW4 1024 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-208ENST00000514335 CCNT1O60563 726 aaKnown RBP7.87□□□□□ -1.15
NIPBL-208ENST00000514335 E2F2Q14209 437 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 FAM26DQ5JW98 314 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 TCERG1LQ5VWI1 586 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 C1orf122Q6ZSJ8 110 aa7.87□□□□□ -1.15
NIPBL-208ENST00000514335 RTKN2Q8IZC4 609 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms