RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 TRPC6Q9Y210 931 aa27.37■■□□□ 1.97
SRPK1-210ENST00000508473 SLC4A7Q9Y6M7 1214 aa27.37■■□□□ 1.97
SRPK1-210ENST00000508473 TANC1Q9C0D5 1861 aa27.36■■□□□ 1.97
SRPK1-210ENST00000508473 TDP2O95551 362 aa27.36■■□□□ 1.97
SRPK1-210ENST00000508473 CTSHP09668 335 aa27.36■■□□□ 1.97
SRPK1-210ENST00000508473 MBTPS1Q14703 1052 aa27.36■■□□□ 1.97
SRPK1-210ENST00000508473 INF2Q27J81 1249 aa27.36■■□□□ 1.97
SRPK1-210ENST00000508473 ABHD15Q6UXT9 468 aa27.36■■□□□ 1.97
SRPK1-210ENST00000508473 RSPH10B2B2RC85 870 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 MSH4O15457 936 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 RSPH10BP0C881 870 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 INSRRP14616 1297 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 DNAJB2P25686 324 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 RBM25P49756 843 aaKnown RBP27.35■■□□□ 1.97
SRPK1-210ENST00000508473 PLCB4Q15147 1175 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 MIS18BP1Q6P0N0 1132 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 RUFY4Q6ZNE9 571 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 PLPPR4Q7Z2D5 763 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 CCDC83Q8IWF9 413 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 GJA10Q969M2 543 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 ZBTB10Q96DT7 871 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 PBX4Q9BYU1 374 aa27.35■■□□□ 1.97
SRPK1-210ENST00000508473 CCDC194A0A1B0GVG4 234 aa27.34■■□□□ 1.97
SRPK1-210ENST00000508473 PARNO95453 639 aaKnown RBP27.34■■□□□ 1.97
SRPK1-210ENST00000508473 SWSAP1Q6NVH7 229 aa27.34■■□□□ 1.97
SRPK1-210ENST00000508473 CCDC60Q8IWA6 550 aaPredicted RBP27.34■■□□□ 1.97
SRPK1-210ENST00000508473 TTYH1Q9H313 450 aaPredicted RBP27.34■■□□□ 1.97
SRPK1-210ENST00000508473 TCEAL9Q9UHQ7 104 aa27.34■■□□□ 1.97
SRPK1-210ENST00000508473 IGKV6D-21A0A0A0MT36 114 aa27.33■■□□□ 1.97
SRPK1-210ENST00000508473 CXCL10P02778 98 aa27.33■■□□□ 1.97
SRPK1-210ENST00000508473 TCTN1Q2MV58 587 aa27.33■■□□□ 1.97
SRPK1-210ENST00000508473 FAM160B1Q5W0V3 765 aa27.33■■□□□ 1.97
SRPK1-210ENST00000508473 ZNF746Q6NUN9 644 aaPredicted RBP27.33■■□□□ 1.97
SRPK1-210ENST00000508473 PIK3AP1Q6ZUJ8 805 aa27.33■■□□□ 1.97
SRPK1-210ENST00000508473 TET1Q8NFU7 2136 aa27.33■■□□□ 1.97
SRPK1-210ENST00000508473 SEMA6BQ9H3T3 888 aa27.33■■□□□ 1.97
SRPK1-210ENST00000508473 ZNF302Q9NR11 478 aa27.33■■□□□ 1.97
SRPK1-210ENST00000508473 TUBE1Q9UJT0 475 aa27.33■■□□□ 1.97
SRPK1-210ENST00000508473 POTEB3A0JP26 581 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 ATP2A2P16615 1042 aaKnown RBP27.32■■□□□ 1.96
SRPK1-210ENST00000508473 RABGGTBP53611 331 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 KRT76Q01546 638 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 LETM2Q2VYF4 491 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 Q4G0T1 1027 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 MARCH8Q5T0T0 291 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 PDXDC2PQ6P474 469 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 POTEBQ6S5H4 581 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 TRAPPC12Q8WVT3 735 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 TIFAQ96CG3 184 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 SAMM50Q9Y512 469 aa27.32■■□□□ 1.96
SRPK1-210ENST00000508473 CYP3A7-CYP3A51PA0A087WV96 503 aa27.31■■□□□ 1.96
SRPK1-210ENST00000508473 RRN3P2A6NIE6 340 aa27.31■■□□□ 1.96
SRPK1-210ENST00000508473 GAS7O60861 476 aa27.31■■□□□ 1.96
SRPK1-210ENST00000508473 CYP3A7P24462 503 aa27.31■■□□□ 1.96
SRPK1-210ENST00000508473 EARS2Q5JPH6 523 aaKnown RBP27.31■■□□□ 1.96
SRPK1-210ENST00000508473 CNKSR3Q6P9H4 555 aa27.31■■□□□ 1.96
SRPK1-210ENST00000508473 SLC5A5Q92911 643 aa27.31■■□□□ 1.96
SRPK1-210ENST00000508473 GUCD1Q96NT3 240 aa27.31■■□□□ 1.96
SRPK1-210ENST00000508473 OSBPL7Q9BZF2 842 aa27.31■■□□□ 1.96
SRPK1-210ENST00000508473 UPF2Q9HAU5 1272 aaKnown RBP27.31■■□□□ 1.96
SRPK1-210ENST00000508473 MBLAC1A4D2B0 266 aaPredicted RBP27.3■■□□□ 1.96
SRPK1-210ENST00000508473 CHMP2AO43633 222 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 CAND2O75155 1236 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 KRT2P35908 639 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 NR5A1Q13285 461 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 LRCH2Q5VUJ6 765 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 TAF2Q6P1X5 1199 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 TRMT1LQ7Z2T5 733 aaKnown RBP27.3■■□□□ 1.96
SRPK1-210ENST00000508473 SMAP1Q8IYB5 467 aaPredicted RBP27.3■■□□□ 1.96
SRPK1-210ENST00000508473 TNPO1Q92973 898 aaKnown RBP27.3■■□□□ 1.96
SRPK1-210ENST00000508473 ZSCAN31Q96LW9 406 aaPredicted RBP27.3■■□□□ 1.96
SRPK1-210ENST00000508473 RIT2Q99578 217 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 TEKT3Q9BXF9 490 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 DDX25Q9UHL0 483 aaKnown RBP27.3■■□□□ 1.96
SRPK1-210ENST00000508473 MSRAQ9UJ68 235 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 PCDHA10Q9Y5I2 948 aa27.3■■□□□ 1.96
SRPK1-210ENST00000508473 FAM205CA6NFA0 338 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 PSAPP07602 524 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 SLC26A2P50443 739 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 RABEP1Q15276 862 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 RAB30Q15771 203 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 NEK8Q86SG6 692 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 CKAP2LQ8IYA6 745 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 ATP8B4Q8TF62 1192 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 DNAJB3Q8WWF6 145 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 MBOAT7Q96N66 472 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 FAM49AQ9H0Q0 323 aaPredicted RBP27.29■■□□□ 1.96
SRPK1-210ENST00000508473 NKX2-4Q9H2Z4 354 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 UNC45AQ9H3U1 944 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 BRMS1Q9HCU9 246 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 GABBR1Q9UBS5 961 aa27.29■■□□□ 1.96
SRPK1-210ENST00000508473 YBX2Q9Y2T7 364 aaKnown RBP27.29■■□□□ 1.96
SRPK1-210ENST00000508473 KAT6AQ92794 2004 aa27.28■■□□□ 1.96
SRPK1-210ENST00000508473 WDR64B1ANS9 1081 aa27.28■■□□□ 1.96
SRPK1-210ENST00000508473 SLC37A4O43826 429 aa27.28■■□□□ 1.96
SRPK1-210ENST00000508473 BAIAP3O94812 1187 aa27.28■■□□□ 1.96
SRPK1-210ENST00000508473 MYOGP15173 224 aa27.28■■□□□ 1.96
SRPK1-210ENST00000508473 ATP4AP20648 1035 aa27.28■■□□□ 1.96
SRPK1-210ENST00000508473 TRIM29Q14134 588 aa27.28■■□□□ 1.96
SRPK1-210ENST00000508473 KRT40Q6A162 431 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms