RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 PDE8AO60658 829 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 KIF4AO95239 1232 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 ANP32DO95626 131 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 RPSAP08865 295 aaKnown RBP17.36■□□□□ 0.37
SCLT1-208ENST00000506368 KLRC1P26715 233 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 CCNG1P51959 295 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 EHHADHQ08426 723 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 CCDC38Q502W7 563 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 UNC13DQ70J99 1090 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 DZIP3Q86Y13 1208 aaKnown RBP17.36■□□□□ 0.37
SCLT1-208ENST00000506368 ANKRD13CQ8N6S4 541 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 SPDL1Q96EA4 605 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 STK32BQ9NY57 414 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 STK17AQ9UEE5 414 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 RTCBQ9Y3I0 505 aaKnown RBP17.36■□□□□ 0.37
SCLT1-208ENST00000506368 BZW2Q9Y6E2 419 aaKnown RBP17.36■□□□□ 0.37
SCLT1-208ENST00000506368 MINDY4BA8MYZ0 360 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 M0R2N6 131 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 OPLAHO14841 1288 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 SART1O43290 800 aaKnown RBP17.36■□□□□ 0.37
SCLT1-208ENST00000506368 CTNND1O60716 968 aaKnown RBP17.36■□□□□ 0.37
SCLT1-208ENST00000506368 PPFIA2O75334 1257 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 GNA14O95837 355 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 MYO1EQ12965 1108 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 MKRN4PQ13434 485 aaPredicted RBP17.36■□□□□ 0.37
SCLT1-208ENST00000506368 CAPRIN2Q6IMN6 1127 aaKnown RBP17.36■□□□□ 0.37
SCLT1-208ENST00000506368 TRPM8Q7Z2W7 1104 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 RASGEF1CQ8N431 466 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 TEX9Q8N6V9 391 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 CCDC85AQ96PX6 553 aaPredicted RBP17.36■□□□□ 0.37
SCLT1-208ENST00000506368 RAB17Q9H0T7 212 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 POLD4Q9HCU8 107 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 AIPL1Q9NZN9 384 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 ATAD5Q96QE3 1844 aa17.36■□□□□ 0.37
SCLT1-208ENST00000506368 CCDC169A6NNP5 214 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 PHF20L1A8MW92 1017 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 ABLIM1O14639 778 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 FTCDO95954 541 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 PLCG1P19174 1290 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 GNAQP50148 359 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 RBBP5Q15291 538 aaKnown RBP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 KIAA0895Q8NCT3 520 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 ARHGEF1Q92888 912 aaKnown RBP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 IFT74Q96LB3 600 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 SLC24A3Q9HC58 644 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 SRP68Q9UHB9 627 aaKnown RBP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 DIS3Q9Y2L1 958 aaKnown RBP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 UTP11Q9Y3A2 253 aaKnown RBP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 CASZ1Q86V15 1759 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 hCG_1642624A0A1W2PR95 340 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 KCNK3O14649 394 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 SMNDC1O75940 238 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 FLOT1O75955 427 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 GBP1P32455 592 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 MMP13P45452 471 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 CCNHP51946 323 aaPredicted RBP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 RWDD2BP57060 319 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 SYCE1Q8N0S2 351 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 STAMBPL1Q96FJ0 436 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 CALML4Q96GE6 196 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 KCNMB3Q9NPA1 279 aa17.35■□□□□ 0.37
SCLT1-208ENST00000506368 TTC7AQ9ULT0 858 aaPredicted RBP17.35■□□□□ 0.37
SCLT1-208ENST00000506368 MAGEB6P1A0A0J9YX57 407 aa17.34■□□□□ 0.37
SCLT1-208ENST00000506368 FAM83BQ5T0W9 1011 aa17.34■□□□□ 0.37
SCLT1-208ENST00000506368 NLRP10Q86W26 655 aa17.34■□□□□ 0.37
SCLT1-208ENST00000506368 TBC1D31Q96DN5 1066 aa17.34■□□□□ 0.37
SCLT1-208ENST00000506368 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
SCLT1-208ENST00000506368 LRP2BPQ9P2M1 347 aa17.34■□□□□ 0.37
SCLT1-208ENST00000506368 MYH7BA7E2Y1 1941 aa17.34■□□□□ 0.37
SCLT1-208ENST00000506368 WFS1O76024 890 aa17.33■□□□□ 0.37
SCLT1-208ENST00000506368 OR52Z1P0C646 297 aa17.33■□□□□ 0.37
SCLT1-208ENST00000506368 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.37
SCLT1-208ENST00000506368 ACCSLQ4AC99 568 aa17.33■□□□□ 0.37
SCLT1-208ENST00000506368 MIS18BP1Q6P0N0 1132 aa17.33■□□□□ 0.37
SCLT1-208ENST00000506368 SV2BQ7L1I2 683 aa17.33■□□□□ 0.37
SCLT1-208ENST00000506368 OR2W6PQ8NHA6 318 aa17.33■□□□□ 0.37
SCLT1-208ENST00000506368 A0A0A6YYK5 440 aaPredicted RBP17.33■□□□□ 0.36
SCLT1-208ENST00000506368 IRS4O14654 1257 aaPredicted RBP17.33■□□□□ 0.36
SCLT1-208ENST00000506368 AGTP01019 485 aa17.33■□□□□ 0.36
SCLT1-208ENST00000506368 MMEP08473 750 aa17.33■□□□□ 0.36
SCLT1-208ENST00000506368 FCER1AP12319 257 aa17.33■□□□□ 0.36
SCLT1-208ENST00000506368 NQO1P15559 274 aaKnown RBP17.33■□□□□ 0.36
SCLT1-208ENST00000506368 TRAPPC3LQ5T215 181 aa17.33■□□□□ 0.36
SCLT1-208ENST00000506368 BTNL9Q6UXG8 535 aa17.33■□□□□ 0.36
SCLT1-208ENST00000506368 LRRC55Q6ZSA7 311 aa17.33■□□□□ 0.36
SCLT1-208ENST00000506368 CEP63Q96MT8 703 aa17.33■□□□□ 0.36
SCLT1-208ENST00000506368 TXLNGYQ9BZA5 131 aa17.33■□□□□ 0.36
SCLT1-208ENST00000506368 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
SCLT1-208ENST00000506368 AHCYL1O43865 530 aa17.32■□□□□ 0.36
SCLT1-208ENST00000506368 CLTAP09496 248 aa17.32■□□□□ 0.36
SCLT1-208ENST00000506368 PDE6CP51160 858 aa17.32■□□□□ 0.36
SCLT1-208ENST00000506368 NPEPPSP55786 919 aa17.32■□□□□ 0.36
SCLT1-208ENST00000506368 MARSP56192 900 aaKnown RBP17.32■□□□□ 0.36
SCLT1-208ENST00000506368 DHX9Q08211 1270 aaKnown RBP17.32■□□□□ 0.36
SCLT1-208ENST00000506368 KCNMA1Q12791 1236 aa17.32■□□□□ 0.36
SCLT1-208ENST00000506368 TRADDQ15628 312 aa17.32■□□□□ 0.36
SCLT1-208ENST00000506368 TBC1D5Q92609 795 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms