RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 UBXN4Q92575 508 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 LARP4BQ92615 738 aaKnown RBP5.03□□□□□ -1.6
PHC3-216ENST00000497171 SCYL1Q96KG9 808 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 DNAJC2Q99543 621 aaKnown RBP5.03□□□□□ -1.6
PHC3-216ENST00000497171 DPYSL5Q9BPU6 564 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 SLC6A20Q9NP91 592 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 KCND1Q9NSA2 647 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 PARPBPQ9NWS1 579 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 MRVI1Q9Y6F6 885 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 PCSK5Q92824 1860 aa5.03□□□□□ -1.6
PHC3-216ENST00000497171 SLC27A2O14975 620 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 STK10O94804 968 aaKnown RBP5.02□□□□□ -1.61
PHC3-216ENST00000497171 SCG5P05408 212 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 TESK1Q15569 626 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 DPP8Q6V1X1 898 aaPredicted RBP5.02□□□□□ -1.61
PHC3-216ENST00000497171 Q6ZSN1 163 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 PROSER1Q86XN7 944 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 RASGRP4Q8TDF6 673 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 CLIP3Q96DZ5 547 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 SEC16BQ96JE7 1060 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 AGAP2Q99490 1192 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 PLA2G12BQ9BX93 195 aa5.02□□□□□ -1.61
PHC3-216ENST00000497171 TMEM191CA6NGB0 347 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 PLSCR1O15162 318 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 CYP27B1O15528 508 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 FAHP16930 419 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 POLD1P28340 1107 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 HNRNPA0Q13151 305 aaKnown RBP5.01□□□□□ -1.61
PHC3-216ENST00000497171 PAN2Q504Q3 1202 aaKnown RBP5.01□□□□□ -1.61
PHC3-216ENST00000497171 MCF2L2Q86YR7 1114 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 ZNF808Q8N4W9 903 aaPredicted RBP5.01□□□□□ -1.61
PHC3-216ENST00000497171 ANAPC16Q96DE5 110 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 GMLQ99445 158 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 TLR9Q9NR96 1032 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 PUF60Q9UHX1 559 aaKnown RBP5.01□□□□□ -1.61
PHC3-216ENST00000497171 PTPN22Q9Y2R2 807 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 GIT1Q9Y2X7 761 aa5.01□□□□□ -1.61
PHC3-216ENST00000497171 FGRP09769 529 aa5□□□□□ -1.61
PHC3-216ENST00000497171 RRADP55042 308 aa5□□□□□ -1.61
PHC3-216ENST00000497171 PFKPQ01813 784 aa5□□□□□ -1.61
PHC3-216ENST00000497171 TUSC3Q13454 348 aa5□□□□□ -1.61
PHC3-216ENST00000497171 RNF151Q2KHN1 245 aa5□□□□□ -1.61
PHC3-216ENST00000497171 SV2CQ496J9 727 aa5□□□□□ -1.61
PHC3-216ENST00000497171 SGMS1Q86VZ5 419 aa5□□□□□ -1.61
PHC3-216ENST00000497171 PIP4K2CQ8TBX8 421 aa5□□□□□ -1.61
PHC3-216ENST00000497171 TACO1Q9BSH4 297 aaKnown RBP5□□□□□ -1.61
PHC3-216ENST00000497171 TTPALQ9BTX7 342 aa5□□□□□ -1.61
PHC3-216ENST00000497171 LCP1P13796 627 aa4.99□□□□□ -1.61
PHC3-216ENST00000497171 BMP5P22003 454 aa4.99□□□□□ -1.61
PHC3-216ENST00000497171 MSX2P35548 267 aaPredicted RBP4.99□□□□□ -1.61
PHC3-216ENST00000497171 CYP4F3Q08477 520 aa4.99□□□□□ -1.61
PHC3-216ENST00000497171 SPIRE1Q08AE8 756 aa4.99□□□□□ -1.61
PHC3-216ENST00000497171 CRHR2Q13324 411 aa4.99□□□□□ -1.61
PHC3-216ENST00000497171 FNDC7Q5VTL7 733 aa4.99□□□□□ -1.61
PHC3-216ENST00000497171 CD276Q5ZPR3 534 aa4.99□□□□□ -1.61
PHC3-216ENST00000497171 ZNF227Q86WZ6 799 aa4.99□□□□□ -1.61
PHC3-216ENST00000497171 LGR4Q9BXB1 951 aa4.99□□□□□ -1.61
PHC3-216ENST00000497171 ZNF703Q9H7S9 590 aaPredicted RBP4.99□□□□□ -1.61
PHC3-216ENST00000497171 R3HCC1Q9Y3T6 440 aaKnown RBP4.99□□□□□ -1.61
PHC3-216ENST00000497171 ESYT3A0FGR9 886 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 ZNF839A8K0R7 811 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 ARHGAP6O43182 974 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 ETFBP38117 255 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 PRSS53Q2L4Q9 553 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 ADGRE4PQ86SQ3 457 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 CKAP2LQ8IYA6 745 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 THEMISQ8N1K5 641 aaPredicted RBP4.98□□□□□ -1.61
PHC3-216ENST00000497171 KREMEN2Q8NCW0 462 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 MICAL1Q8TDZ2 1067 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 CLEC4DQ8WXI8 215 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 ZNF408Q9H9D4 720 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 STRIP2Q9ULQ0 834 aa4.98□□□□□ -1.61
PHC3-216ENST00000497171 PEX11BO96011 259 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 GNAT1P11488 350 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 ETV4P43268 484 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 GFRA1P56159 465 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 MRPS21P82921 87 aaKnown RBP4.97□□□□□ -1.61
PHC3-216ENST00000497171 TOP3AQ13472 1001 aaPredicted RBP4.97□□□□□ -1.61
PHC3-216ENST00000497171 WDR72Q3MJ13 1102 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.97□□□□□ -1.61
PHC3-216ENST00000497171 ULK2Q8IYT8 1036 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 SHDQ96IW2 340 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 HIRIP3Q9BW71 556 aaPredicted RBP4.97□□□□□ -1.61
PHC3-216ENST00000497171 JAM3Q9BX67 310 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 NELFAQ9H3P2 528 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 PLA2G3Q9NZ20 509 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 FBXO10Q9UK96 956 aa4.97□□□□□ -1.61
PHC3-216ENST00000497171 CAPN14A8MX76 684 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 ARNTLO00327 626 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 TBX1O43435 398 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 HMGCRP04035 888 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 NFYCQ13952 458 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 CCDC142Q17RM4 750 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 LRCH2Q5VUJ6 765 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 ANKS3Q6ZW76 656 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 DPH6Q7L8W6 267 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 ZNF627Q7L945 461 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 OTOP3Q7RTS5 596 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 D2HGDHQ8N465 521 aa4.96□□□□□ -1.62
PHC3-216ENST00000497171 TMEM145Q8NBT3 493 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms