RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 NUCKS1Q9H1E3 243 aaKnown RBP16.32■□□□□ 0.2
CHTOP-206ENST00000495554 VCPKMTQ9H867 229 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 HDAC6Q9UBN7 1215 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 AKR1B10O60218 316 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 CYP3A4P08684 503 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 SPATA31C1P0DKV0 1188 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 EIF4A3P38919 411 aaKnown RBP16.32■□□□□ 0.2
CHTOP-206ENST00000495554 RAD51AP2Q09MP3 1159 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 KCNMA1Q12791 1236 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 CIAPIN1Q6FI81 312 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 KRT26Q7Z3Y9 468 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 TRIM59Q8IWR1 403 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 RPGRIP1Q96KN7 1286 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 GOPCQ9HD26 462 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 ST7Q9NRC1 585 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 PCDHA13Q9Y5I0 950 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 DUSP10Q9Y6W6 482 aa16.32■□□□□ 0.2
CHTOP-206ENST00000495554 MACROD2A1Z1Q3 448 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 MSH4O15457 936 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 EGFRP00533 1210 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 RHOXF2BP0C7M4 288 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 PDXDC1Q6P996 788 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 ZC3H3Q8IXZ2 948 aaKnown RBP16.31■□□□□ 0.2
CHTOP-206ENST00000495554 TRIM58Q8NG06 486 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 RHOXF2Q9BQY4 288 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 UBXN6Q9BZV1 441 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 ZHX3Q9H4I2 956 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 MYOZ2Q9NPC6 264 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 CEP72Q9P209 647 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 FAM184BQ9ULE4 1060 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHTOP-206ENST00000495554 ADAM9Q13443 819 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 GIT2Q14161 759 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 KCTD17Q8N5Z5 321 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 CCDC155Q8N6L0 562 aa16.31■□□□□ 0.2
CHTOP-206ENST00000495554 SYN2Q92777 582 aaPredicted RBP16.31■□□□□ 0.2
CHTOP-206ENST00000495554 RANBP17Q9H2T7 1088 aaKnown RBP16.31■□□□□ 0.2
CHTOP-206ENST00000495554 SSU72P8A0A1W2PR75 194 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 NFKBIEO00221 500 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 ZNF76P36508 570 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 PSMC6P62333 389 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 CKAP4Q07065 602 aaKnown RBP16.3■□□□□ 0.2
CHTOP-206ENST00000495554 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.24e-7■■□□□ 12.7
CHTOP-206ENST00000495554 ZYXQ15942 572 aaKnown RBP16.3■□□□□ 0.2
CHTOP-206ENST00000495554 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
CHTOP-206ENST00000495554 BEND6Q5SZJ8 279 aaPredicted RBP16.3■□□□□ 0.2
CHTOP-206ENST00000495554 NOA1Q8NC60 698 aaKnown RBP16.3■□□□□ 0.2
CHTOP-206ENST00000495554 SMCR8Q8TEV9 937 aaPredicted RBP16.3■□□□□ 0.2
CHTOP-206ENST00000495554 GBP3Q9H0R5 595 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 SH3BP1Q9Y3L3 701 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 PHF20L1A8MW92 1017 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 MEIS1O00470 390 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 CETN3O15182 167 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 PLA2G6O60733 806 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 TACC1O75410 805 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 TXLNBQ8N3L3 684 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 ZNF526Q8TF50 670 aaPredicted RBP16.3■□□□□ 0.2
CHTOP-206ENST00000495554 POLR3CQ9BUI4 534 aaPredicted RBP16.3■□□□□ 0.2
CHTOP-206ENST00000495554 TAOK3Q9H2K8 898 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 SH2D4AQ9H788 454 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 YY1AP1Q9H869 796 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 FBXO28Q9NVF7 368 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 GEMIN8Q9NWZ8 242 aaKnown RBP16.3■□□□□ 0.2
CHTOP-206ENST00000495554 JRKLQ9Y4A0 524 aa16.3■□□□□ 0.2
CHTOP-206ENST00000495554 MAP2K7O14733 419 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 CHURC1Q8WUH1 139 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 REEP2Q9BRK0 252 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 FER1L6Q2WGJ9 1857 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 IGLV3-22A0A075B6J6 115 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 SRGAP2O75044 1071 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 RASA3Q14644 834 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 SMC1AQ14683 1233 aaKnown RBP16.29■□□□□ 0.2
CHTOP-206ENST00000495554 ASTE1Q2TB18 679 aaPredicted RBP16.29■□□□□ 0.2
CHTOP-206ENST00000495554 WDR93Q6P2C0 686 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 CCDC174Q6PII3 467 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 TEPSINQ96N21 525 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 MMS19Q96T76 1030 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 TRAF3IP3Q9Y228 551 aa16.29■□□□□ 0.2
CHTOP-206ENST00000495554 NOL4O94818 638 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 VSNL1P62760 191 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 KNOP1Q1ED39 458 aaKnown RBP16.28■□□□□ 0.2
CHTOP-206ENST00000495554 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 HGSNATQ68CP4 663 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 HDXQ7Z353 690 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 JDP2Q8WYK2 163 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 JADE2Q9NQC1 790 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 CFBP00751 764 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 NR2F2P24468 414 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 ZNF280AP59817 542 aaPredicted RBP16.28■□□□□ 0.2
CHTOP-206ENST00000495554 SFMBT2Q5VUG0 894 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 ZNF771Q7L3S4 317 aaPredicted RBP16.28■□□□□ 0.2
CHTOP-206ENST00000495554 EPM2AIP1Q7L775 607 aaPredicted RBP16.28■□□□□ 0.2
CHTOP-206ENST00000495554 LSM14BQ9BX40 385 aaKnown RBP16.28■□□□□ 0.2
CHTOP-206ENST00000495554 L1RE1Q9UN81 338 aa16.28■□□□□ 0.2
CHTOP-206ENST00000495554 PJA2O43164 708 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 ASNSP08243 561 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 EPS15P42566 896 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 MAGEA1P43355 309 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 CASP5P51878 434 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms