RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 CCDC66A2RUB6 948 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 ACOT7O00154 380 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 MAN2B1O00754 1011 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 SRGAP2CP0DJJ0 459 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 KRT15P19012 456 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 EPHB4P54760 987 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 ADAM17P78536 824 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 DBPQ10586 325 aaPredicted RBP5.12□□□□□ -1.59
NF1-213ENST00000489712 C16orf59Q7L2K0 433 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 PTRH1Q86Y79 214 aaKnown RBP5.12□□□□□ -1.59
NF1-213ENST00000489712 REXO1L1PQ8IX06 675 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 IFNL2Q8IZJ0 200 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 PMFBP1Q8TBY8 1022 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 KISS1RQ969F8 398 aaPredicted RBP5.12□□□□□ -1.59
NF1-213ENST00000489712 GPR20Q99678 358 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 ARHGAP28Q9P2N2 729 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 CBLCQ9ULV8 474 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 ZDHHC9Q9Y397 364 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 PCDHA9Q9Y5H5 950 aa5.12□□□□□ -1.59
NF1-213ENST00000489712 PRAMEF25A6NGN4 478 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 H0Y858 1186 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 ZNF561-AS1K7EIQ3 104 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 AMY2AP04746 511 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 AMY2BP19961 511 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 DNM2P50570 870 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 ZNF568Q3ZCX4 644 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 Q6ZUG5 572 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 CISD2Q8N5K1 135 aaKnown RBP5.11□□□□□ -1.59
NF1-213ENST00000489712 CHST13Q8NET6 341 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 THAP3Q8WTV1 239 aaPredicted RBP5.11□□□□□ -1.59
NF1-213ENST00000489712 DNAJC7Q99615 494 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 TACO1Q9BSH4 297 aaKnown RBP5.11□□□□□ -1.59
NF1-213ENST00000489712 SLC39A2Q9NP94 309 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 JADE2Q9NQC1 790 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 PPP4R1LQ9P1A2 415 aa5.11□□□□□ -1.59
NF1-213ENST00000489712 CCDC163A0A0D9SF12 145 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.1□□□□□ -1.59
NF1-213ENST00000489712 NPEPPSL1A6NEC2 478 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 FAM90A27PA6NNH2 459 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 IL18BPO95998 194 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 JAM2P57087 298 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 PPP2CBP62714 309 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 PPP2CAP67775 309 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 C2orf27AQ580R0 203 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 TRIM61Q5EBN2 209 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 CPZQ66K79 652 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 SLFN13Q68D06 897 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 DPP8Q6V1X1 898 aaPredicted RBP5.1□□□□□ -1.59
NF1-213ENST00000489712 LIMS2Q7Z4I7 341 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 OSTM1Q86WC4 334 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 CIR1Q86X95 450 aaPredicted RBP5.1□□□□□ -1.59
NF1-213ENST00000489712 GSTCDQ8NEC7 633 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 SREK1Q8WXA9 508 aaKnown RBP5.1□□□□□ -1.59
NF1-213ENST00000489712 AJUBAQ96IF1 538 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 C8orf49Q96NF6 230 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 SSBP3Q9BWW4 388 aaPredicted RBP5.1□□□□□ -1.59
NF1-213ENST00000489712 JAG2Q9Y219 1238 aa5.1□□□□□ -1.59
NF1-213ENST00000489712 B4GALT4O60513 344 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 CLASP2O75122 1294 aaKnown RBP5.09□□□□□ -1.59
NF1-213ENST00000489712 RASGRP1O95267 797 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 PTGS1P23219 599 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 AOAHP28039 575 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 CSF2RBP32927 897 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 HERVK_113P62684 666 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 GPR155Q7Z3F1 870 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 JMYQ8N9B5 988 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 MAGEB10Q96LZ2 347 aaPredicted RBP5.09□□□□□ -1.59
NF1-213ENST00000489712 DNAJC2Q99543 621 aaKnown RBP5.09□□□□□ -1.59
NF1-213ENST00000489712 MRPL4Q9BYD3 311 aaKnown RBP5.09□□□□□ -1.59
NF1-213ENST00000489712 CELF4Q9BZC1 486 aaKnown RBP5.09□□□□□ -1.59
NF1-213ENST00000489712 OSBPL2Q9H1P3 480 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 SMURF1Q9HCE7 757 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 PTCH2Q9Y6C5 1203 aa5.09□□□□□ -1.59
NF1-213ENST00000489712 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.08□□□□□ -1.6
NF1-213ENST00000489712 KCNK3O14649 394 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 CUTAO60888 179 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 ZNF20P17024 532 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 POLD1P28340 1107 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 LACTBP83111 547 aaPredicted RBP5.08□□□□□ -1.6
NF1-213ENST00000489712 USP10Q14694 798 aaKnown RBP5.08□□□□□ -1.6
NF1-213ENST00000489712 NFE2L2Q16236 605 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 ZXDCQ2QGD7 858 aaPredicted RBP5.08□□□□□ -1.6
NF1-213ENST00000489712 BRAPQ7Z569 592 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 SLC7A14Q8TBB6 771 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 DVL3Q92997 716 aaPredicted RBP5.08□□□□□ -1.6
NF1-213ENST00000489712 C1QTNF3Q9BXJ4 246 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 KATNBL1Q9H079 304 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 MEGF9Q9H1U4 602 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 INCENPQ9NQS7 918 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 MYRFQ9Y2G1 1151 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 COQ6Q9Y2Z9 468 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 SLC4A7Q9Y6M7 1214 aa5.08□□□□□ -1.6
NF1-213ENST00000489712 GPR42O15529 346 aa5.07□□□□□ -1.6
NF1-213ENST00000489712 CNOT4O95628 575 aaKnown RBP5.07□□□□□ -1.6
NF1-213ENST00000489712 C4BPAP04003 597 aaKnown RBP5.07□□□□□ -1.6
NF1-213ENST00000489712 INSRRP14616 1297 aa5.07□□□□□ -1.6
NF1-213ENST00000489712 TOP3AQ13472 1001 aaPredicted RBP5.07□□□□□ -1.6
NF1-213ENST00000489712 PUM1Q14671 1186 aaKnown RBP eCLIP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms