RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 MARCH8Q5T0T0 291 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 JAKMIP3Q5VZ66 844 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 KRT40Q6A162 431 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 RUFY4Q6ZNE9 571 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 NIPA1Q7RTP0 329 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 PLPPR4Q7Z2D5 763 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 RSPH3Q86UC2 560 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 TNPO1Q92973 898 aaKnown RBP10.76□□□□□ -0.69
NUP50-215ENST00000484186 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 AGO4Q9HCK5 861 aaKnown RBP10.76□□□□□ -0.69
NUP50-215ENST00000484186 LMCD1Q9NZU5 365 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 TUBE1Q9UJT0 475 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 PRUNE2Q8WUY3 3088 aa10.76□□□□□ -0.69
NUP50-215ENST00000484186 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.75□□□□□ -0.69
NUP50-215ENST00000484186 PRPF3O43395 683 aaKnown RBP10.75□□□□□ -0.69
NUP50-215ENST00000484186 UPP2O95045 317 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 ATG7O95352 703 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 RPLP2P05387 115 aaKnown RBP10.75□□□□□ -0.69
NUP50-215ENST00000484186 STAT5BP51692 787 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 IGBP1P78318 339 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 MGAT3Q09327 533 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 ITGB3BPQ13352 177 aaPredicted RBP10.75□□□□□ -0.69
NUP50-215ENST00000484186 PLCB4Q15147 1175 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 PKN1Q16512 942 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 AAK1Q2M2I8 961 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 MCTP2Q6DN12 878 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
NUP50-215ENST00000484186 GDPD5Q8WTR4 605 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 CCDC12Q8WUD4 166 aaPredicted RBP10.75□□□□□ -0.69
NUP50-215ENST00000484186 DNAJB3Q8WWF6 145 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 IFIH1Q9BYX4 1025 aaKnown RBP10.75□□□□□ -0.69
NUP50-215ENST00000484186 ZMYND12Q9H0C1 365 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 SUGCTQ9HAC7 445 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 C6orf50Q9HD87 102 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 MTUS1Q9ULD2 1270 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 COG5Q9UP83 839 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 KAT6AQ92794 2004 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 NID2Q14112 1375 aa10.75□□□□□ -0.69
NUP50-215ENST00000484186 ESYT2A0FGR8 921 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 TNFRSF10AO00220 468 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 EPB41L2O43491 1005 aaKnown RBP10.74□□□□□ -0.69
NUP50-215ENST00000484186 CYP3A4P08684 503 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 GHRP10912 638 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 GNA11P29992 359 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 AKAP17AQ02040 695 aaKnown RBP10.74□□□□□ -0.69
NUP50-215ENST00000484186 LPIN1Q14693 890 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 NTRK3Q16288 839 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 ABHD15Q6UXT9 468 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 PLA2G4DQ86XP0 818 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 IL27Q8NEV9 243 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 CRYGNQ8WXF5 182 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 SAMD11Q96NU1 681 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 YME1L1Q96TA2 773 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 C17orf80Q9BSJ5 609 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 CHD7Q9P2D1 2997 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 TRPC6Q9Y210 931 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 CDY2AQ9Y6F7 541 aa10.74□□□□□ -0.69
NUP50-215ENST00000484186 PRRC2BQ5JSZ5 2229 aaKnown RBP10.74□□□□□ -0.69
NUP50-215ENST00000484186 SPTBN5Q9NRC6 3674 aaKnown RBP10.73□□□□□ -0.69
NUP50-215ENST00000484186 IGKV6D-21A0A0A0MT36 114 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 POTEB3A0JP26 581 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 FAM86B1E9PN63 330 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 DDX39AO00148 427 aaKnown RBP10.73□□□□□ -0.69
NUP50-215ENST00000484186 ENPP3O14638 875 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 ADAMTS3O15072 1205 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 DHX15O43143 795 aaKnown RBP10.73□□□□□ -0.69
NUP50-215ENST00000484186 FAM86B2P0C5J1 330 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 BMP1P13497 986 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 IFNAR1P17181 557 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 PDIA3P30101 505 aaKnown RBP10.73□□□□□ -0.69
NUP50-215ENST00000484186 SLC26A2P50443 739 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 EVCP57679 992 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 MRPS6P82932 125 aaKnown RBP10.73□□□□□ -0.69
NUP50-215ENST00000484186 TFF2Q03403 129 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 FBXO47Q5MNV8 452 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 IER5Q5VY09 327 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 POTEBQ6S5H4 581 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 RUFY3Q7L099 469 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 REXO1Q8N1G1 1221 aaKnown RBP10.73□□□□□ -0.69
NUP50-215ENST00000484186 NME8Q8N427 588 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 ADAMTS19Q8TE59 1207 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 PHKBQ93100 1093 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 HLA-CQ95604 372 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 ZBTB10Q96DT7 871 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 RNF26Q9BY78 433 aaPredicted RBP10.73□□□□□ -0.69
NUP50-215ENST00000484186 PCDHA2Q9Y5H9 948 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 MICAL3Q7RTP6 2002 aa10.73□□□□□ -0.69
NUP50-215ENST00000484186 VCANP13611 3396 aa10.72□□□□□ -0.69
NUP50-215ENST00000484186 IGLV3-22A0A075B6J6 115 aa10.72□□□□□ -0.69
NUP50-215ENST00000484186 SMIM35A0A1B0GVV1 85 aa10.72□□□□□ -0.69
NUP50-215ENST00000484186 IPO5O00410 1097 aaKnown RBP10.72□□□□□ -0.69
NUP50-215ENST00000484186 HBP1O60381 514 aa10.72□□□□□ -0.69
NUP50-215ENST00000484186 CCNE2O96020 404 aa10.72□□□□□ -0.69
NUP50-215ENST00000484186 CCT2P78371 535 aaKnown RBP10.72□□□□□ -0.69
NUP50-215ENST00000484186 EPC2Q52LR7 807 aa10.72□□□□□ -0.69
NUP50-215ENST00000484186 FAM160B1Q5W0V3 765 aa10.72□□□□□ -0.69
NUP50-215ENST00000484186 MIS18BP1Q6P0N0 1132 aa10.72□□□□□ -0.69
NUP50-215ENST00000484186 MTHFD1LQ6UB35 978 aa10.72□□□□□ -0.69
NUP50-215ENST00000484186 TSHZ1Q6ZSZ6 1077 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms