RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 STK3Q13188 491 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 LAPTM5Q13571 262 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 KRT72Q14CN4 511 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 FSTL4Q6MZW2 842 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 LILRA6Q6PI73 481 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 ARHGAP36Q6ZRI8 547 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 SMAP1Q8IYB5 467 aaPredicted RBP6.62□□□□□ -1.35
COPA-203ENST00000481040 USHBP1Q8N6Y0 703 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 PAF1Q8N7H5 531 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 ZBTB34Q8NCN2 500 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 LINC00116Q8NCU8 138 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 DIS3LQ8TF46 1054 aaKnown RBP6.62□□□□□ -1.35
COPA-203ENST00000481040 SSH1Q8WYL5 1049 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 ACAP3Q96P50 834 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 GTPBP4Q9BZE4 634 aaKnown RBP6.62□□□□□ -1.35
COPA-203ENST00000481040 DUSP15Q9H1R2 295 aaPredicted RBP6.62□□□□□ -1.35
COPA-203ENST00000481040 FAM204AQ9H8W3 233 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 SP110Q9HB58 689 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 AP5S1Q9NUS5 200 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 DNAJC28Q9NX36 388 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 LUZP4Q9P127 313 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 ANAPC4Q9UJX5 808 aa6.62□□□□□ -1.35
COPA-203ENST00000481040 ABHD14A-ACY1A0A1B0GW23 586 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 FAM95CA0A1B0GW59 222 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 TCRBV5S4A2TA0A5A2 114 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 C7orf72A4D263 438 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 HIP1RO75146 1068 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 HRGP04196 525 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 SETSIPP0DME0 302 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 GNAT1P11488 350 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 AGXTP21549 392 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 C5AR1P21730 350 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 CD40P25942 277 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 MAP4P27816 1152 aaKnown RBP6.61□□□□□ -1.35
COPA-203ENST00000481040 PCBP3P57721 371 aaKnown RBP6.61□□□□□ -1.35
COPA-203ENST00000481040 LLGL1Q15334 1064 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 LONRF1Q17RB8 773 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 XRRA1Q6P2D8 792 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 SKAP1Q86WV1 359 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 PTRH1Q86Y79 214 aaKnown RBP6.61□□□□□ -1.35
COPA-203ENST00000481040 NOSTRINQ8IVI9 506 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 ZZZ3Q8IYH5 903 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 CPXCR1Q8N123 301 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 MFSD4AQ8N468 514 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 HEXIM2Q96MH2 286 aaKnown RBP6.61□□□□□ -1.35
COPA-203ENST00000481040 ZNF277Q9NRM2 450 aaPredicted RBP6.61□□□□□ -1.35
COPA-203ENST00000481040 GTF2IRD1Q9UHL9 959 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 TCFL5Q9UL49 500 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 GPR45Q9Y5Y3 372 aa6.61□□□□□ -1.35
COPA-203ENST00000481040 SSU72P8A0A1W2PR75 194 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 H7BY64 318 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 NBNO60934 754 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 TBC1D8O95759 1140 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 BMP3P12645 472 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 PTX3P26022 381 aaPredicted RBP6.6□□□□□ -1.35
COPA-203ENST00000481040 SSTR4P31391 388 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 ECE1P42892 770 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 MTNR1BP49286 362 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 PPM1FP49593 454 aaPredicted RBP6.6□□□□□ -1.35
COPA-203ENST00000481040 IRX6P78412 446 aaPredicted RBP6.6□□□□□ -1.35
COPA-203ENST00000481040 SRSF2Q01130 221 aaKnown RBP6.6□□□□□ -1.35
COPA-203ENST00000481040 SPIRE1Q08AE8 756 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 NFKBIBQ15653 356 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 IFI16Q16666 785 aaKnown RBP6.6□□□□□ -1.35
COPA-203ENST00000481040 ESRP1Q6NXG1 681 aaKnown RBP6.6□□□□□ -1.35
COPA-203ENST00000481040 OVCH2Q7RTZ1 564 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 NLRP10Q86W26 655 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 GRAMD1CQ8IYS0 662 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 NME8Q8N427 588 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 FAM156AQ8NDB6 213 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 ACRBPQ8NEB7 543 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 UBE2Q2Q8WVN8 375 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 MAP3K14Q99558 947 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 SENP7Q9BQF6 1050 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 CDADC1Q9BWV3 514 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 FOXP3Q9BZS1 431 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 TRIT1Q9H3H1 467 aaKnown RBP6.6□□□□□ -1.35
COPA-203ENST00000481040 ACSS2Q9NR19 701 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 ADGRE2Q9UHX3 823 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 RAXQ9Y2V3 346 aa6.6□□□□□ -1.35
COPA-203ENST00000481040 WTIPA6NIX2 430 aaPredicted RBP6.59□□□□□ -1.35
COPA-203ENST00000481040 IGF2BP3O00425 579 aaKnown RBP eCLIP6.59□□□□□ -1.35
COPA-203ENST00000481040 MAN2B1O00754 1011 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 SCDO00767 359 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 PIP5K1CO60331 668 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 NPHS1O60500 1241 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 TGFB1P01137 390 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 CYP17A1P05093 508 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 COL6A2P12110 1019 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 ZKSCAN1P17029 563 aaPredicted RBP6.59□□□□□ -1.35
COPA-203ENST00000481040 TYRP1P17643 537 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 ENPP1P22413 925 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 CD97P48960 835 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 TOR2AQ5JU69 321 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 HABP4Q5JVS0 413 aaKnown RBP6.59□□□□□ -1.35
COPA-203ENST00000481040 CCDC149Q6ZUS6 474 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 CEP68Q76N32 757 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 TSPYL5Q86VY4 417 aaPredicted RBP6.59□□□□□ -1.35
COPA-203ENST00000481040 DPF3Q92784 378 aa6.59□□□□□ -1.35
COPA-203ENST00000481040 NGRNQ9NPE2 291 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms