RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ERAP1Q9NZ08 941 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 TUBE1Q9UJT0 475 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 CDY2AQ9Y6F7 541 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 GOLGA8AA7E2F4 631 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 GOLGA8BA8MQT2 603 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 STXBP3O00186 592 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 ZBTB43O43298 467 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 CAND2O75155 1236 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 CD52P31358 61 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 ADCY7P51828 1080 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 ITGB3BPQ13352 177 aaPredicted RBP13.34□□□□□ -0.27
VARS2-208ENST00000477052 EP400NLQ6ZTU2 488 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 DHX32Q7L7V1 743 aaKnown RBP13.34□□□□□ -0.27
VARS2-208ENST00000477052 TMEM192Q8IY95 271 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 CDHR1Q96JP9 859 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 ANO3Q9BYT9 981 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 SMARCAD1Q9H4L7 1026 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 EHMT1Q9H9B1 1298 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 AGO3Q9H9G7 860 aaKnown RBP13.34□□□□□ -0.27
VARS2-208ENST00000477052 RIC8AQ9NPQ8 531 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 LMCD1Q9NZU5 365 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 SLC9A2Q9UBY0 812 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 TRPC6Q9Y210 931 aa13.34□□□□□ -0.27
VARS2-208ENST00000477052 SMCO2A6NFE2 343 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 H3BQ06 376 aaPredicted RBP13.33□□□□□ -0.28
VARS2-208ENST00000477052 ENPP3O14638 875 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 ADD1P35611 737 aaKnown RBP13.33□□□□□ -0.28
VARS2-208ENST00000477052 ACTR2P61160 394 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 APOBRQ0VD83 1088 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 PLCB4Q15147 1175 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 TCEAL5Q5H9L2 206 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 FBXO47Q5MNV8 452 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 RNF20Q5VTR2 975 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 JAKMIP3Q5VZ66 844 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 IL17RAQ96F46 866 aa13.33□□□□□ -0.28
VARS2-208ENST00000477052 AGO4Q9HCK5 861 aaKnown RBP13.33□□□□□ -0.28
VARS2-208ENST00000477052 MYO7AQ13402 2215 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.32□□□□□ -0.28
VARS2-208ENST00000477052 MBLAC1A4D2B0 266 aaPredicted RBP13.32□□□□□ -0.28
VARS2-208ENST00000477052 FAM86C2PA6NEL3 165 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 H3BNC9 293 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 CCNE2O96020 404 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 IL9P15248 144 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 CTNNB1P35222 781 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 MRPS6P82932 125 aaKnown RBP13.32□□□□□ -0.28
VARS2-208ENST00000477052 TAF2Q6P1X5 1199 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 CENPQQ7L2Z9 268 aaPredicted RBP13.32□□□□□ -0.28
VARS2-208ENST00000477052 TRMT1LQ7Z2T5 733 aaKnown RBP13.32□□□□□ -0.28
VARS2-208ENST00000477052 RTN4RL1Q86UN2 441 aaPredicted RBP13.32□□□□□ -0.28
VARS2-208ENST00000477052 FIBCD1Q8N539 461 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.32□□□□□ -0.28
VARS2-208ENST00000477052 APBB2Q92870 758 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 MRPL38Q96DV4 380 aaKnown RBP13.32□□□□□ -0.28
VARS2-208ENST00000477052 AZI2Q9H6S1 392 aa13.32□□□□□ -0.28
VARS2-208ENST00000477052 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
VARS2-208ENST00000477052 NLRC5Q86WI3 1866 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 GRM6O15303 877 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 CDC45O75419 566 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 LINC00271P0C7V0 271 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 ZNF76P36508 570 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 GATMP50440 423 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 TMEM266Q2M3C6 531 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 CEP55Q53EZ4 464 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 RSPH3Q86UC2 560 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 BANK1Q8NDB2 785 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 PPP1R16BQ96T49 567 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 SDF4Q9BRK5 362 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 CDHR5Q9HBB8 845 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 BARHL2Q9NY43 387 aa13.31□□□□□ -0.28
VARS2-208ENST00000477052 POTEB3A0JP26 581 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 RRN3P2A6NIE6 340 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 FAM86B1E9PN63 330 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 MEIS1O00470 390 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 FAM86B2P0C5J1 330 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 CLK2P49760 499 aaKnown RBP13.3□□□□□ -0.28
VARS2-208ENST00000477052 STAT5BP51692 787 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 FGD1P98174 961 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 PTPROQ16827 1216 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 PAN2Q504Q3 1202 aaKnown RBP13.3□□□□□ -0.28
VARS2-208ENST00000477052 POTEBQ6S5H4 581 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 TSHZ1Q6ZSZ6 1077 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 Q6ZUG5 572 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 PLA2G4DQ86XP0 818 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 RASGRP4Q8TDF6 673 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 BRF1Q92994 677 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 PHKBQ93100 1093 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 JAKMIP1Q96N16 626 aaKnown RBP13.3□□□□□ -0.28
VARS2-208ENST00000477052 GINS2Q9Y248 185 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 COL4A6Q14031 1691 aa13.3□□□□□ -0.28
VARS2-208ENST00000477052 ATG2AQ2TAZ0 1938 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 LOXHD1Q8IVV2 1947 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 BACH1O14867 736 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 MAFGO15525 162 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 KLRC1P26715 233 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 GTF2F1P35269 517 aaKnown RBP eCLIP13.29□□□□□ -0.28
VARS2-208ENST00000477052 BMPR1AP36894 532 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 SREBF1P36956 1147 aa13.29□□□□□ -0.28
VARS2-208ENST00000477052 METAP2P50579 478 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms