RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 FGF19O95750 216 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 EEF1GP26641 437 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 NSFP46459 744 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 MTMR3Q13615 1198 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 RASGRF1Q13972 1273 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 CCDC24Q8N4L8 307 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 CDKL2Q92772 493 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 USP13Q92995 863 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 SPATA33Q96N06 139 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 GRPEL1Q9HAV7 217 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 PRMT7Q9NVM4 692 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 ERAP1Q9NZ08 941 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 PCDHA10Q9Y5I2 948 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 IKBKBO14920 756 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PSMD3O43242 534 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 DGAT1O75907 488 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 NPTXRO95502 500 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 TGFB3P10600 412 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 GYS1P13807 737 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 CMA1P23946 247 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 QARSP47897 775 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 ST8SIA6P61647 398 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 ZNF667Q5HYK9 610 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 MYSM1Q5VVJ2 828 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 MOXD1Q6UVY6 613 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 C4orf50Q6ZRC1 276 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 STAG2Q8N3U4 1231 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 TMEM199Q8N511 208 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 SHCBP1Q8NEM2 672 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 DTNBP1Q96EV8 351 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 RIT2Q99578 217 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 OXCT2Q9BYC2 517 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 DEFB129Q9H1M3 183 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 ZCCHC17Q9NP64 241 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 SLC9A2Q9UBY0 812 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 NRBP1Q9UHY1 535 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 FAM205AQ6ZU69 1335 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PSMD14O00487 310 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 SH2B2O14492 632 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 KCNQ3O43525 872 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 APOEP02649 317 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PCSK1P29120 753 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 AXLP30530 894 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 ARL1P40616 181 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 MCAMP43121 646 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 NOP14P78316 857 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 TAF2Q6P1X5 1199 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 TTC23LQ6PF05 361 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 FBXO33Q7Z6M2 555 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 DDX27Q96GQ7 796 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 STRBPQ96SI9 672 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 RAB17Q9H0T7 212 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 STN1Q9H668 368 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 TRIM45Q9H8W5 580 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PLCB1Q9NQ66 1216 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PRDM5Q9NQX1 630 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PCDHB15Q9Y5E8 787 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PCDHB12Q9Y5F1 795 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 USH1CQ9Y6N9 552 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 GPR75-ASB3A0A0A6YYF3 556 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 C17orf102A2RUQ5 167 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 TXNP10599 105 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 AKR1A1P14550 325 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 GARTP22102 1010 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 CYP4A11Q02928 519 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PPFIA1Q13136 1202 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 RGMBQ6NW40 437 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 ITIH5Q86UX2 942 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 COL23A1Q86Y22 540 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 SDR42E1Q8WUS8 393 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 SMC6Q96SB8 1091 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 TSEN34Q9BSV6 310 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 MTG1Q9BT17 334 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 ALDH8A1Q9H2A2 487 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 TFIP11Q9UBB9 837 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 DBNLQ9UJU6 430 aaKnown RBP5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PCDHA6Q9UN73 950 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PCDHB7Q9Y5E2 793 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PCDHA8Q9Y5H6 950 aa5.02□□□□□ -1.61
CCNL1-215ENST00000474539 PNMA6EA0A0J9YXQ4 647 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 PVALEFA0A1B0GWK0 134 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 SLC15A5A6NIM6 579 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 F5H6K3 240 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 ZBTB48P10074 688 aaPredicted RBP5.01□□□□□ -1.61
CCNL1-215ENST00000474539 SRGNP10124 158 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 MNAT1P51948 309 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 KPNA1P52294 538 aaPredicted RBP5.01□□□□□ -1.61
CCNL1-215ENST00000474539 KLRC3Q07444 240 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 KLHL30Q0D2K2 578 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 SNW1Q13573 536 aaKnown RBP5.01□□□□□ -1.61
CCNL1-215ENST00000474539 KRT24Q2M2I5 525 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 FAM83BQ5T0W9 1011 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 STAMQ92783 540 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 EMILIN2Q9BXX0 1053 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 ANKEF1Q9NU02 776 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 CTTNBP2NLQ9P2B4 639 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 PALD1Q9ULE6 856 aa5.01□□□□□ -1.61
CCNL1-215ENST00000474539 G3BP2Q9UN86 482 aaKnown RBP5.01□□□□□ -1.61
CCNL1-215ENST00000474539 DIS3Q9Y2L1 958 aaKnown RBP5.01□□□□□ -1.61
CCNL1-215ENST00000474539 SLIT3O75094 1523 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms