RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 C11orf84Q9BUA3 381 aaPredicted RBP16.52■□□□□ 0.24
TARDBP-204ENST00000472476 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
TARDBP-204ENST00000472476 PLAGL2Q9UPG8 496 aa16.52■□□□□ 0.24
TARDBP-204ENST00000472476 UBIAD1Q9Y5Z9 338 aa16.52■□□□□ 0.24
TARDBP-204ENST00000472476 CDY2AQ9Y6F7 541 aa16.52■□□□□ 0.24
TARDBP-204ENST00000472476 PLXNA4Q9HCM2 1894 aa16.52■□□□□ 0.23
TARDBP-204ENST00000472476 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
TARDBP-204ENST00000472476 MMP1P03956 469 aa16.51■□□□□ 0.23
TARDBP-204ENST00000472476 SMARCA1P28370 1054 aa16.51■□□□□ 0.23
TARDBP-204ENST00000472476 PPFIA1Q13136 1202 aa16.51■□□□□ 0.23
TARDBP-204ENST00000472476 NCOA7Q8NI08 942 aa16.51■□□□□ 0.23
TARDBP-204ENST00000472476 SEPT1Q8WYJ6 367 aa16.51■□□□□ 0.23
TARDBP-204ENST00000472476 GPRASP2Q96D09 838 aa16.51■□□□□ 0.23
TARDBP-204ENST00000472476 MRPL42Q9Y6G3 142 aaKnown RBP16.51■□□□□ 0.23
TARDBP-204ENST00000472476 ERICH2A1L162 156 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 ITGB1P05556 798 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 MARK3P27448 753 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 CD52P31358 61 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 MRE11P49959 708 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 BTG3Q14201 252 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-204ENST00000472476 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-204ENST00000472476 TSHZ1Q6ZSZ6 1077 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 ADGRD2Q7Z7M1 963 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 NLRX1Q86UT6 975 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 ZNF654Q8IZM8 581 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 CMTR1Q8N1G2 835 aaKnown RBP16.5■□□□□ 0.23
TARDBP-204ENST00000472476 GIMAP8Q8ND71 665 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-204ENST00000472476 SPPL3Q8TCT6 385 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 RRP36Q96EU6 259 aaKnown RBP16.5■□□□□ 0.23
TARDBP-204ENST00000472476 IGFLR1Q9H665 355 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 CLEC1BQ9P126 229 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 MUTYHQ9UIF7 546 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 TUBE1Q9UJT0 475 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 FAM50BQ9Y247 325 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 RWDD3Q9Y3V2 267 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 USP34Q70CQ2 3546 aa16.5■□□□□ 0.23
TARDBP-204ENST00000472476 SGSM2O43147 1006 aa16.49■□□□□ 0.23
TARDBP-204ENST00000472476 EYA4O95677 639 aa16.49■□□□□ 0.23
TARDBP-204ENST00000472476 INSRRP14616 1297 aa16.49■□□□□ 0.23
TARDBP-204ENST00000472476 MRPS6P82932 125 aaKnown RBP16.49■□□□□ 0.23
TARDBP-204ENST00000472476 SMAD4Q13485 552 aaKnown RBP16.49■□□□□ 0.23
TARDBP-204ENST00000472476 UBE2SQ16763 222 aa16.49■□□□□ 0.23
TARDBP-204ENST00000472476 P2RX5Q93086 422 aa16.49■□□□□ 0.23
TARDBP-204ENST00000472476 PLVAPQ9BX97 442 aa16.49■□□□□ 0.23
TARDBP-204ENST00000472476 ERAP1Q9NZ08 941 aa16.49■□□□□ 0.23
TARDBP-204ENST00000472476 FNDC1Q4ZHG4 1894 aaPredicted RBP16.48■□□□□ 0.23
TARDBP-204ENST00000472476 CSPG5O95196 566 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 GATMP50440 423 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 RALYLQ86SE5 291 aaKnown RBP16.48■□□□□ 0.23
TARDBP-204ENST00000472476 CUL5Q93034 780 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 KCNH6Q9H252 994 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 TMX1Q9H3N1 280 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 SMARCAD1Q9H4L7 1026 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 PSTPIP2Q9H939 334 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 JADE2Q9NQC1 790 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 CD207Q9UJ71 328 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 SQORQ9Y6N5 450 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 EVPLQ92817 2033 aa16.48■□□□□ 0.23
TARDBP-204ENST00000472476 ZDBF2Q9HCK1 2354 aa16.47■□□□□ 0.23
TARDBP-204ENST00000472476 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
TARDBP-204ENST00000472476 DDAH1O94760 285 aa16.47■□□□□ 0.23
TARDBP-204ENST00000472476 IGBP1P78318 339 aa16.47■□□□□ 0.23
TARDBP-204ENST00000472476 SART3Q15020 963 aaKnown RBP16.47■□□□□ 0.23
TARDBP-204ENST00000472476 KLHL23Q8NBE8 558 aa16.47■□□□□ 0.23
TARDBP-204ENST00000472476 CYP2W1Q8TAV3 490 aa16.47■□□□□ 0.23
TARDBP-204ENST00000472476 TRAPPC12Q8WVT3 735 aa16.47■□□□□ 0.23
TARDBP-204ENST00000472476 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
TARDBP-204ENST00000472476 PADI3Q9ULW8 664 aa16.47■□□□□ 0.23
TARDBP-204ENST00000472476 PCDHGC5Q9Y5F6 944 aa16.47■□□□□ 0.23
TARDBP-204ENST00000472476 STXBP3O00186 592 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 GLP2RO95838 553 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 RXRAP19793 462 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 TMEM62Q0P6H9 643 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 MTMR1Q13613 665 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 PLCB4Q15147 1175 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 CMTR2Q8IYT2 770 aaKnown RBP16.46■□□□□ 0.23
TARDBP-204ENST00000472476 EDAQ92838 391 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 GLG1Q92896 1179 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 CDHR1Q96JP9 859 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 PHOX2BQ99453 314 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 FAM49AQ9H0Q0 323 aaPredicted RBP16.46■□□□□ 0.23
TARDBP-204ENST00000472476 PCDHA6Q9UN73 950 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 PCDHA8Q9Y5H6 950 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 PCDHA2Q9Y5H9 948 aa16.46■□□□□ 0.23
TARDBP-204ENST00000472476 RBM8AQ9Y5S9 174 aaKnown RBP16.46■□□□□ 0.23
TARDBP-204ENST00000472476 IGSF9BQ9UPX0 1349 aa16.45■□□□□ 0.22
TARDBP-204ENST00000472476 RRN3P2A6NIE6 340 aa16.45■□□□□ 0.22
TARDBP-204ENST00000472476 LOC730098B7Z3J9 87 aa16.45■□□□□ 0.22
TARDBP-204ENST00000472476 SH2B2O14492 632 aaPredicted RBP16.45■□□□□ 0.22
TARDBP-204ENST00000472476 MAFGO15525 162 aa16.45■□□□□ 0.22
TARDBP-204ENST00000472476 PRC1O43663 620 aa16.45■□□□□ 0.22
TARDBP-204ENST00000472476 COASYQ13057 564 aa16.45■□□□□ 0.22
TARDBP-204ENST00000472476 NAALADL2Q58DX5 795 aa16.45■□□□□ 0.22
TARDBP-204ENST00000472476 NPAS4Q8IUM7 802 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms