RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CYP46A1Q9Y6A2 500 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 CHD9Q3L8U1 2897 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 MICAL3Q7RTP6 2002 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 IGLV3-22A0A075B6J6 115 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 MBLAC1A4D2B0 266 aaPredicted RBP10.28□□□□□ -0.76
USF1-204ENST00000472217 RFXAPO00287 272 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 GJB5O95377 273 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 CCNE2O96020 404 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 CYP3A4P08684 503 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 IFNAR1P17181 557 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 AKAP17AQ02040 695 aaKnown RBP10.28□□□□□ -0.76
USF1-204ENST00000472217 CCDC85BQ15834 202 aaPredicted RBP10.28□□□□□ -0.76
USF1-204ENST00000472217 FAM26DQ5JW98 314 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 MARCH8Q5T0T0 291 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 MCTP2Q6DN12 878 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 TAF2Q6P1X5 1199 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.28□□□□□ -0.765e-7■■■■□ 21.8
USF1-204ENST00000472217 RPAINQ86UA6 219 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 PLA2G4DQ86XP0 818 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 ARNTL2Q8WYA1 636 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 SLC26A6Q9BXS9 759 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 TM6SF1Q9BZW5 370 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 AZI2Q9H6S1 392 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 PRDM6Q9NQX0 595 aa10.28□□□□□ -0.76
USF1-204ENST00000472217 DDX39AO00148 427 aaKnown RBP10.27□□□□□ -0.77
USF1-204ENST00000472217 ATG7O95352 703 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 CHRNA1P02708 482 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 INSRRP14616 1297 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 GNA11P29992 359 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 IGBP1P78318 339 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 PLCB4Q15147 1175 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 FAM117BQ6P1L5 589 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 PLPPR4Q7Z2D5 763 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 MYOCDQ8IZQ8 938 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 MICALL1Q8N3F8 863 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 CCDC148Q8NFR7 591 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 RASGRP4Q8TDF6 673 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 TRAPPC12Q8WVT3 735 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 DNAJB3Q8WWF6 145 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 SEPT8Q92599 483 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 ZBTB10Q96DT7 871 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 UIMC1Q96RL1 719 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 RAD9AQ99638 391 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 LARP6Q9BRS8 491 aaKnown RBP10.27□□□□□ -0.77
USF1-204ENST00000472217 VPS54Q9P1Q0 977 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
USF1-204ENST00000472217 IGKV6D-21A0A0A0MT36 114 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.26□□□□□ -0.77
USF1-204ENST00000472217 RRN3P2A6NIE6 340 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 IPO5O00410 1097 aaKnown RBP10.26□□□□□ -0.77
USF1-204ENST00000472217 DHX15O43143 795 aaKnown RBP10.26□□□□□ -0.77
USF1-204ENST00000472217 AMHP03971 560 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 GHRP10912 638 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 STAT5BP51692 787 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 MGAT3Q09327 533 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 STK3Q13188 491 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 ABHD15Q6UXT9 468 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 CCDC60Q8IWA6 550 aaPredicted RBP10.26□□□□□ -0.77
USF1-204ENST00000472217 BICD2Q8TD16 824 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 APBB2Q92870 758 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 ZNF274Q96GC6 653 aaPredicted RBP10.26□□□□□ -0.77
USF1-204ENST00000472217 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
USF1-204ENST00000472217 PDRG1Q9NUG6 133 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 MTUS1Q9ULD2 1270 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 MTCH2Q9Y6C9 303 aa10.26□□□□□ -0.77
USF1-204ENST00000472217 COL4A6Q14031 1691 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 KAT6AQ92794 2004 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 LINC01553A4QN01 128 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 CPLX1O14810 134 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 GTPBP6O43824 516 aaPredicted RBP10.25□□□□□ -0.77
USF1-204ENST00000472217 POU3F3P20264 500 aaPredicted RBP10.25□□□□□ -0.77
USF1-204ENST00000472217 SLC26A2P50443 739 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 MRPS6P82932 125 aaKnown RBP10.25□□□□□ -0.77
USF1-204ENST00000472217 HTRA4P83105 476 aaPredicted RBP10.25□□□□□ -0.77
USF1-204ENST00000472217 SETQ01105 290 aaPredicted RBP10.25□□□□□ -0.77
USF1-204ENST00000472217 SSRP1Q08945 709 aaKnown RBP10.25□□□□□ -0.77
USF1-204ENST00000472217 GRB10Q13322 594 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 LPIN1Q14693 890 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 PRR16Q569H4 304 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 ERICH6BQ5W0A0 696 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 KRT40Q6A162 431 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 RSPH3Q86UC2 560 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 TRIM22Q8IYM9 498 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 GDPD5Q8WTR4 605 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 ZNF577Q9BSK1 485 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 FAM49AQ9H0Q0 323 aaPredicted RBP10.25□□□□□ -0.77
USF1-204ENST00000472217 SH3GLB2Q9NR46 395 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 THEGQ9P2T0 379 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 INSL6Q9Y581 213 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 CDY2AQ9Y6F7 541 aa10.25□□□□□ -0.77
USF1-204ENST00000472217 EYSQ5T1H1 3165 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 BACH1O14867 736 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 EDIL3O43854 480 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 LPXNO60711 386 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 UPP2O95045 317 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 DEXIO95424 95 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 RPLP2P05387 115 aaKnown RBP10.24□□□□□ -0.77
USF1-204ENST00000472217 CIITAP33076 1130 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms