RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PTPN1P18031 435 aaKnown RBP7.35□□□□□ -1.23
CD46-213ENST00000471987 GABREP78334 506 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 GUCY1A3Q02108 690 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 DBPQ10586 325 aaPredicted RBP7.35□□□□□ -1.23
CD46-213ENST00000471987 LONRF2Q1L5Z9 754 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 FOXB2Q5VYV0 432 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 EP400NLQ6ZTU2 488 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 IFNL2Q8IZJ0 200 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 PCDH19Q8TAB3 1148 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 TACO1Q9BSH4 297 aaKnown RBP7.35□□□□□ -1.23
CD46-213ENST00000471987 KATNBL1Q9H079 304 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 SEC61A2Q9H9S3 476 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 CD248Q9HCU0 757 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 TSC22D4Q9Y3Q8 395 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 PCDHA8Q9Y5H6 950 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 ARVCFO00192 962 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 DIAPH1O60610 1272 aaKnown RBP7.34□□□□□ -1.23
CD46-213ENST00000471987 CSF2RBP32927 897 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 GJA4P35212 333 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 ST5P78524 1137 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 FIGNQ5HY92 759 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 DPP8Q6V1X1 898 aaPredicted RBP7.34□□□□□ -1.23
CD46-213ENST00000471987 C16orf59Q7L2K0 433 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 PTPN18Q99952 460 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 KLC2Q9H0B6 622 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 MEGF9Q9H1U4 602 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 DEF6Q9H4E7 631 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 SLC39A2Q9NP94 309 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 RIC8BQ9NVN3 520 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 ATP23Q9Y6H3 246 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 SLC4A7Q9Y6M7 1214 aa7.34□□□□□ -1.23
CD46-213ENST00000471987 FAM90A27PA6NNH2 459 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 PATE3B3GLJ2 98 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 CNOT4O95628 575 aaKnown RBP7.33□□□□□ -1.24
CD46-213ENST00000471987 FAM153BP0C7A2 387 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 PDE6AP16499 860 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 GTF2F1P35269 517 aaKnown RBP eCLIP7.33□□□□□ -1.24
CD46-213ENST00000471987 ZXDAP98168 799 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 FAM47CQ5HY64 1035 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 ZC3H12BQ5HYM0 836 aaKnown RBP7.33□□□□□ -1.24
CD46-213ENST00000471987 ARMC5Q96C12 935 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 EXOC2Q96KP1 924 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 C8orf37Q96NL8 207 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 DHRS4Q9BTZ2 278 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 ARHGAP28Q9P2N2 729 aa7.33□□□□□ -1.24
CD46-213ENST00000471987 KDM2BQ8NHM5 1336 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 MAN2B1O00754 1011 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 CUTAO60888 179 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 APPP05067 770 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 SRGAP2CP0DJJ0 459 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 PYGMP11217 842 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 POLD1P28340 1107 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 USP10Q14694 798 aaKnown RBP7.32□□□□□ -1.24
CD46-213ENST00000471987 CRY1Q16526 586 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 ZNF568Q3ZCX4 644 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 GPR155Q7Z3F1 870 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 LRP10Q7Z4F1 713 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 OSTM1Q86WC4 334 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 PTRH1Q86Y79 214 aaKnown RBP7.32□□□□□ -1.24
CD46-213ENST00000471987 CBLCQ9ULV8 474 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 MRPS23Q9Y3D9 190 aaKnown RBP7.32□□□□□ -1.24
CD46-213ENST00000471987 TCAF1Q9Y4C2 921 aa7.32□□□□□ -1.24
CD46-213ENST00000471987 AMY2AP04746 511 aa7.31□□□□□ -1.24
CD46-213ENST00000471987 KRT15P19012 456 aa7.31□□□□□ -1.24
CD46-213ENST00000471987 AMY2BP19961 511 aa7.31□□□□□ -1.24
CD46-213ENST00000471987 SELENOPP49908 381 aa7.31□□□□□ -1.24
CD46-213ENST00000471987 CDSNQ15517 529 aa7.31□□□□□ -1.24
CD46-213ENST00000471987 ZC3H7AQ8IWR0 971 aaKnown RBP7.31□□□□□ -1.24
CD46-213ENST00000471987 SH3RF3Q8TEJ3 882 aaPredicted RBP7.31□□□□□ -1.24
CD46-213ENST00000471987 LMF1Q96S06 567 aa7.31□□□□□ -1.24
CD46-213ENST00000471987 CARD11Q9BXL7 1154 aa7.31□□□□□ -1.24
CD46-213ENST00000471987 SEMA4AQ9H3S1 761 aa7.31□□□□□ -1.24
CD46-213ENST00000471987 PCDHA9Q9Y5H5 950 aa7.31□□□□□ -1.24
CD46-213ENST00000471987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.3□□□□□ -1.24
CD46-213ENST00000471987 ZNF561-AS1K7EIQ3 104 aa7.3□□□□□ -1.24
CD46-213ENST00000471987 ZNF623O75123 536 aa7.3□□□□□ -1.24
CD46-213ENST00000471987 CRTAMO95727 393 aa7.3□□□□□ -1.24
CD46-213ENST00000471987 JAM2P57087 298 aa7.3□□□□□ -1.24
CD46-213ENST00000471987 SERINC3Q13530 473 aa7.3□□□□□ -1.24
CD46-213ENST00000471987 ZNF585AQ6P3V2 769 aa7.3□□□□□ -1.24
CD46-213ENST00000471987 DEPDC7Q96QD5 511 aa7.3□□□□□ -1.24
CD46-213ENST00000471987 ESYT3A0FGR9 886 aa7.29□□□□□ -1.24
CD46-213ENST00000471987 CCDC66A2RUB6 948 aa7.29□□□□□ -1.24
CD46-213ENST00000471987 EFCAB14O75071 495 aa7.29□□□□□ -1.24
CD46-213ENST00000471987 RASA3Q14644 834 aa7.29□□□□□ -1.24
CD46-213ENST00000471987 SPRED1Q7Z699 444 aa7.29□□□□□ -1.24
CD46-213ENST00000471987 INCENPQ9NQS7 918 aa7.29□□□□□ -1.24
CD46-213ENST00000471987 CLASP2O75122 1294 aaKnown RBP7.28□□□□□ -1.24
CD46-213ENST00000471987 ZNF888P0CJ79 500 aaPredicted RBP7.28□□□□□ -1.24
CD46-213ENST00000471987 PTGS1P23219 599 aa7.28□□□□□ -1.24
CD46-213ENST00000471987 AOAHP28039 575 aa7.28□□□□□ -1.24
CD46-213ENST00000471987 DNM2P50570 870 aa7.28□□□□□ -1.24
CD46-213ENST00000471987 HERVK_113P62684 666 aa7.28□□□□□ -1.24
CD46-213ENST00000471987 LACTBP83111 547 aaPredicted RBP7.28□□□□□ -1.24
CD46-213ENST00000471987 RBL2Q08999 1139 aa7.28□□□□□ -1.24
CD46-213ENST00000471987 TOP3AQ13472 1001 aaPredicted RBP7.28□□□□□ -1.24
CD46-213ENST00000471987 WDR72Q3MJ13 1102 aa7.28□□□□□ -1.24
CD46-213ENST00000471987 HS1BP3Q53T59 392 aa7.28□□□□□ -1.24
CD46-213ENST00000471987 CXXC5Q7LFL8 322 aaKnown RBP7.28□□□□□ -1.24
CD46-213ENST00000471987 PALM2Q8IXS6 379 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms