RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 BICDL2A1A5D9 508 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 NCALDP61601 193 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 RPS6KA1Q15418 735 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 SLC35G1Q2M3R5 365 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 LRIG3Q6UXM1 1119 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 RUFY4Q6ZNE9 571 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 PIGBQ92521 554 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 ANKS1AQ92625 1134 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 GJA10Q969M2 543 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 SAAL1Q96ER3 474 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 KCNMB3Q9NPA1 279 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 ZMYND8Q9ULU4 1186 aaPredicted RBP8.68□□□□□ -1.02
TPM3-215ENST00000469717 CCDC194A0A1B0GVG4 234 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 KRIT1O00522 736 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 PAEPP09466 180 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 CREB1P16220 341 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 BIRC3Q13489 604 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 MAN2A1Q16706 1144 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 LETM2Q2VYF4 491 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 TRPM8Q7Z2W7 1104 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 ATXN2LQ8WWM7 1075 aaKnown RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 GLG1Q92896 1179 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 RNF41Q9H4P4 317 aaPredicted RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 AZI2Q9H6S1 392 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 SLC5A4Q9NY91 659 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 ZBTB1Q9Y2K1 713 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 PCDHGC5Q9Y5F6 944 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 KIF1AQ12756 1690 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 MYMKA6NI61 221 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 USP17L12C9JPN9 530 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 USP17L21D6R901 530 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 PFKFB3Q16875 520 aaPredicted RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 ARL6IP4Q66PJ3 421 aaKnown RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 OTUD6AQ7L8S5 288 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 FAM114A1Q8IWE2 563 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 SCFD2Q8WU76 684 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 TAF4BQ92750 862 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 RPGRQ92834 1020 aaKnown RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 LRRC45Q96CN5 670 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 EPB41L4BQ9H329 900 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 GOLGA8HP0CJ92 632 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 RARAP10276 462 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 CACNB1Q02641 598 aaPredicted RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 PUM3Q15397 648 aaKnown RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 SLC9C1Q4G0N8 1177 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 SFMBT2Q5VUG0 894 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 AP1ARQ63HQ0 302 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 LRRC55Q6ZSA7 311 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 HEATR3Q7Z4Q2 680 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 RNF10Q8N5U6 811 aaKnown RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 PAIP2Q9BPZ3 127 aaKnown RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 MMTAG2Q9BU76 263 aaKnown RBP8.67□□□□□ -1.02
TPM3-215ENST00000469717 ECT2Q9H8V3 914 aa8.67□□□□□ -1.02
TPM3-215ENST00000469717 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 SIK1P57059 783 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 ADCY1Q08828 1119 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 PRPF4BQ13523 1007 aaKnown RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 CENPPQ6IPU0 288 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 NELFCDQ8IXH7 590 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 C1orf131Q8NDD1 294 aaKnown RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 NUDT12Q9BQG2 462 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 PCDHA6Q9UN73 950 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 PCDHA8Q9Y5H6 950 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 A0A1B0GVG6 124 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 SPDYE5A6NIY4 337 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 PDHA1P08559 390 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 UQCRFS1P1P0C7P4 283 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 NQO1P15559 274 aaKnown RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 FGFR2P21802 821 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 KLHL30Q0D2K2 578 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 ANKRD20A2Q5SQ80 823 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 TRAPPC3LQ5T215 181 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 ANKRD20A1Q5TYW2 823 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 ANKRD20A3Q5VUR7 823 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 AADACL2Q6P093 401 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 KCNK18Q7Z418 384 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 NLRP10Q86W26 655 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 CCDC26Q8TAB7 109 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 EPS8L3Q8TE67 593 aaKnown RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 RNF25Q96BH1 459 aaPredicted RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 ZNF512BQ96KM6 892 aaPredicted RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 NOP53Q9NZM5 478 aaKnown RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 NKX1-2Q9UD57 310 aaPredicted RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 DBR1Q9UK59 544 aaKnown RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 BCORQ6W2J9 1755 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 SRRM3A6NNA2 597 aaPredicted RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 KIF3CO14782 793 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 CCNT1O60563 726 aaKnown RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 GHRP10912 638 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 PTK2Q05397 1052 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 ZNF211Q13398 564 aaPredicted RBP8.66□□□□□ -1.02
TPM3-215ENST00000469717 LLGL1Q15334 1064 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 SLC18A3Q16572 532 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 AGBL2Q5U5Z8 902 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 KRT27Q7Z3Y8 459 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 DAAM2Q86T65 1068 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 TAX1BP1Q86VP1 789 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 ATP8B4Q8TF62 1192 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 TLCD1Q96CP7 247 aa8.66□□□□□ -1.02
TPM3-215ENST00000469717 FGFR1OP2Q9NVK5 253 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms