RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 CPXCR1Q8N123 301 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 HDAC9Q9UKV0 1011 aa19.64■□□□□ 0.73
MCF2L-221ENST00000469415 ZSCAN5CA6NGD5 496 aaPredicted RBP19.63■□□□□ 0.73
MCF2L-221ENST00000469415 OPLAHO14841 1288 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 TBCAO75347 108 aaKnown RBP19.63■□□□□ 0.73
MCF2L-221ENST00000469415 CYP2C19P33261 490 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 GPS2Q13227 327 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 COG2Q14746 738 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 HAUS3Q68CZ6 603 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 MYCT1Q8N699 235 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 TRIM58Q8NG06 486 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 OSBPL9Q96SU4 736 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 TMEM39BQ9GZU3 492 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 ZNF277Q9NRM2 450 aaPredicted RBP19.63■□□□□ 0.73
MCF2L-221ENST00000469415 SNX12Q9UMY4 172 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 PALMO75781 387 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 PSMD2Q13200 908 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 ETNPPLQ8TBG4 499 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 DCAF4Q8WV16 495 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 ALS2CR12Q96Q35 445 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 MYH7BA7E2Y1 1941 aa19.63■□□□□ 0.73
MCF2L-221ENST00000469415 USP11P51784 963 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 HGSNATQ68CP4 663 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 CREG2Q8IUH2 290 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 DYDC2Q96IM9 177 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 EIF2AK1Q9BQI3 630 aaKnown RBP19.62■□□□□ 0.73
MCF2L-221ENST00000469415 TMEM51Q9NW97 253 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 ARMCX3Q9UH62 379 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-221ENST00000469415 PCNTO95613 3336 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 A0A1W2PQJ5 194 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 AKAP3O75969 853 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 ORC2Q13416 577 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-221ENST00000469415 SND1Q7KZF4 910 aaKnown RBP eCLIP19.62■□□□□ 0.73
MCF2L-221ENST00000469415 ERMNQ8TAM6 284 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 LENG9Q96B70 501 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 JRKLQ9Y4A0 524 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 PCDHA2Q9Y5H9 948 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 EIF3JO75822 258 aaKnown RBP19.62■□□□□ 0.73
MCF2L-221ENST00000469415 CYP2J2P51589 502 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 TUBB2AQ13885 445 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 SLFN12Q8IYM2 578 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 IFT81Q8WYA0 676 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 TUBB2BQ9BVA1 445 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 KCTD10Q9H3F6 313 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 RABGAP1Q9Y3P9 1069 aa19.62■□□□□ 0.73
MCF2L-221ENST00000469415 SPIRE1Q08AE8 756 aa19.61■□□□□ 0.73
MCF2L-221ENST00000469415 TRIM59Q8IWR1 403 aa19.61■□□□□ 0.73
MCF2L-221ENST00000469415 HYOU1Q9Y4L1 999 aa19.61■□□□□ 0.73
MCF2L-221ENST00000469415 CAPN2P17655 700 aa19.61■□□□□ 0.73
MCF2L-221ENST00000469415 CKAP4Q07065 602 aaKnown RBP19.61■□□□□ 0.73
MCF2L-221ENST00000469415 FIGNQ5HY92 759 aa19.61■□□□□ 0.73
MCF2L-221ENST00000469415 SPATA4Q8NEY3 305 aa19.61■□□□□ 0.73
MCF2L-221ENST00000469415 AKT1S1Q96B36 256 aa19.61■□□□□ 0.73
MCF2L-221ENST00000469415 EHD4Q9H223 541 aa19.61■□□□□ 0.73
MCF2L-221ENST00000469415 SEPT11Q9NVA2 429 aaKnown RBP19.61■□□□□ 0.73
MCF2L-221ENST00000469415 ATP8B1O43520 1251 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 HOXD13P35453 343 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 STAT2P52630 851 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 TTC19Q6DKK2 380 aaPredicted RBP19.6■□□□□ 0.73
MCF2L-221ENST00000469415 BANK1Q8NDB2 785 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 NOX5Q96PH1 765 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 TMOD2Q9NZR1 351 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 THSD7AQ9UPZ6 1657 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 ANKRD65E5RJM6 399 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 ASIC2Q16515 512 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 LRCH2Q5VUJ6 765 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 WDR18Q9BV38 432 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 RBM12Q9NTZ6 932 aaKnown RBP19.6■□□□□ 0.73
MCF2L-221ENST00000469415 FAM13AO94988 1023 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 PTK2Q05397 1052 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 CC2D2BQ6DHV5 1058 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 TATDN1Q6P1N9 297 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 KLHL7Q8IXQ5 586 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 MKL1Q969V6 931 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 TLR10Q9BXR5 811 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 TSGA10Q9BZW7 698 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 GBP3Q9H0R5 595 aa19.6■□□□□ 0.73
MCF2L-221ENST00000469415 PPP1R1BQ9UD71 204 aaPredicted RBP19.6■□□□□ 0.73
MCF2L-221ENST00000469415 UBR3Q6ZT12 1888 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 XRCC5P13010 732 aaKnown RBP19.59■□□□□ 0.73
MCF2L-221ENST00000469415 KNOP1Q1ED39 458 aaKnown RBP19.59■□□□□ 0.73
MCF2L-221ENST00000469415 LARGE2Q8N3Y3 721 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 SELENOOQ9BVL4 669 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 IDI2Q9BXS1 227 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 UBXN6Q9BZV1 441 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 FAM204AQ9H8W3 233 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 CEP72Q9P209 647 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 AJAP1Q9UKB5 411 aaPredicted RBP19.59■□□□□ 0.73
MCF2L-221ENST00000469415 SAMM50Q9Y512 469 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 SORBS3O60504 671 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 TRIM49P0CI25 452 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 TRIM49CP0CI26 452 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 TRADDQ15628 312 aa19.59■□□□□ 0.73
MCF2L-221ENST00000469415 HNRNPLLQ8WVV9 542 aaKnown RBP19.59■□□□□ 0.73
MCF2L-221ENST00000469415 ZNF831Q5JPB2 1677 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 SHTN1A0MZ66 631 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 TMEM150BA6NC51 233 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 ARP10275 920 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 RPA1P27694 616 aa19.58■□□□□ 0.73
MCF2L-221ENST00000469415 GGCXP38435 758 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms