RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 CDK5RAP2Q96SN8 1893 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 COL5A3P25940 1745 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 GMNCA6NCL1 334 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 E9PMD0 336 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 RASSF9O75901 435 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 PDHBP11177 359 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 TMOD1P28289 359 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 TM4SF1P30408 202 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 CTNNA1P35221 906 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 NOVP48745 357 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 SMTNP53814 917 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 KCNH2Q12809 1159 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 ARFGAP2Q8N6H7 521 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 METTL13Q8N6R0 699 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 ZNF287Q9HBT7 754 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 CD248Q9HCU0 757 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 DDX20Q9UHI6 824 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 FBXL5Q9UKA1 691 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 TRAPPC3O43617 180 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 ITGA4P13612 1032 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 SLC9A1P19634 815 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 GSTO1P78417 241 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 LRRC45Q96CN5 670 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 LRRC4CQ9HCJ2 640 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 A1CFQ9NQ94 594 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 NOC2LQ9Y3T9 749 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 AHDC1Q5TGY3 1603 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
PDZRN3-205ENST00000466780 hCG_1984214I3L0E3 225 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 GNPATO15228 680 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 ADAM9Q13443 819 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 PLCB4Q15147 1175 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 ZNF713Q8N859 430 aaPredicted RBP14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 CALR3Q96L12 384 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 UIMC1Q96RL1 719 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 JPH2Q9BR39 696 aaPredicted RBP14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 NYXQ9GZU5 481 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 DDX25Q9UHL0 483 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 NAGPAQ9UK23 515 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 DCDC2CA8MYV0 355 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 BACH1O14867 736 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 BTDP43251 543 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 HYIQ5T013 277 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 OSBPL7Q9BZF2 842 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 SLC40A1Q9NP59 571 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 KLC4Q9NSK0 619 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 EMILIN3Q9NT22 766 aa14.21□□□□□ -0.13
PDZRN3-205ENST00000466780 PGRMC1O00264 195 aaKnown RBP14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 DAPK3O43293 454 aa14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 PPP1R11O60927 126 aaPredicted RBP14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 MAP2K2P36507 400 aa14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 BIRC3Q13489 604 aa14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 BYSLQ13895 437 aaKnown RBP14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 HERC4Q5GLZ8 1057 aaPredicted RBP14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 C10orf76Q5T2E6 689 aa14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 CCDC65Q8IXS2 484 aa14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 TPCN2Q8NHX9 752 aa14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 RBM46Q8TBY0 533 aaKnown RBP14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 UBLCP1Q8WVY7 318 aaPredicted RBP14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 ZKSCAN4Q969J2 545 aaPredicted RBP14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 GPR101Q96P66 508 aaPredicted RBP14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 AMACRQ9UHK6 382 aa14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 NENFQ9UMX5 172 aa14.21□□□□□ -0.14
PDZRN3-205ENST00000466780 PLA2G4BP0C869 781 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 UCHL3P15374 230 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 SETQ01105 290 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 DRP2Q13474 957 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 TPTE2Q6XPS3 522 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 GPBP1Q86WP2 473 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 BMP2KQ9NSY1 1161 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 BCCIPQ9P287 314 aaKnown RBP eCLIP14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 HDAC9Q9UKV0 1011 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 KIAA1024Q9UPX6 916 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 STXBP5LQ9Y2K9 1186 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 MYH7BA7E2Y1 1941 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 DNM1LO00429 736 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 CYP11B2P19099 503 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 EPS15P42566 896 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 CLK2P49760 499 aaKnown RBP14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 CASP5P51878 434 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 PPP2R2AP63151 447 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 AGBL2Q5U5Z8 902 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 ALKBH5Q6P6C2 394 aaKnown RBP14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 RUFY4Q6ZNE9 571 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 LRRC47Q8N1G4 583 aaKnown RBP14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 C3orf20Q8ND61 904 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 NARFQ9UHQ1 456 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 AJAP1Q9UKB5 411 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 PCDHA12Q9UN75 941 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 NOVA2Q9UNW9 492 aaKnown RBP14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 LEMD3Q9Y2U8 911 aa14.2□□□□□ -0.14
PDZRN3-205ENST00000466780 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 POTECB2RU33 542 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 KRIT1O00522 736 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 LDHCP07864 332 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 EDRF1Q3B7T1 1238 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 FAM182BQ5T319 152 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 CCDC121Q6ZUS5 278 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms