RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 LUC7LQ9NQ29 371 aaKnown RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 AMACRQ9UHK6 382 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 GCOM1H8Y6P7 765 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 SART1O43290 800 aaKnown RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 MYZAPP0CAP1 466 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 ZBTB48P10074 688 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 STAT3P40763 770 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 PPP4CP60510 307 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 HERC4Q5GLZ8 1057 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 LRRC57Q8N9N7 239 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 WDR66Q8TBY9 1149 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 BCAS3Q9H6U6 928 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 SLC12A6Q9UHW9 1150 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 TMCO5BA8MYB1 307 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 DAPK3O43293 454 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 USP11P51784 963 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 ACTN3Q08043 901 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 ORC2Q13416 577 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 TTBK2Q6IQ55 1244 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 GJB7Q6PEY0 223 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 C6orf89Q6UWU4 347 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 GPBP1Q86WP2 473 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 CEP63Q96MT8 703 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 MYCBPQ99417 103 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 DDX20Q9UHI6 824 aaKnown RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 GOLGA6L10A6NI86 522 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 MARCH6O60337 910 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 MICALCLQ6ZW33 695 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 PTF1AQ7RTS3 328 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 SETDB2Q96T68 719 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 HDAC9Q9UKV0 1011 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 TTI1O43156 1089 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 PLA2G4BP0C869 781 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 IBSPP21815 317 aaPredicted RBP12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 NR2F2P24468 414 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 SLC16A2P36021 539 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 CCDC91Q7Z6B0 441 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 YTHDF3Q7Z739 585 aaKnown RBP12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 SPATS2Q86XZ4 545 aaKnown RBP12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 OSBPL7Q9BZF2 842 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 DPH5Q9H2P9 285 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 NAGPAQ9UK23 515 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 NOVA2Q9UNW9 492 aaKnown RBP12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
PDZRN3-203ENST00000462146 MARSP56192 900 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 SF3A3Q12874 501 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 BYSLQ13895 437 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 PPP4R3AQ6IN85 833 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 SPAG5Q96R06 1193 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 TRIM31Q9BZY9 425 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 PCDHA12Q9UN75 941 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 POTEFA5A3E0 1075 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 ATP2C2O75185 946 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 SLURP2P0DP57 97 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 UCHL3P15374 230 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 CYP11B2P19099 503 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 GSTO1P78417 241 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 ARSHQ5FYA8 562 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 ALKBH5Q6P6C2 394 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 POTEGQ6S5H5 508 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 POTEEQ6S8J3 1075 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 LRIG3Q6UXM1 1119 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 ARHGAP27Q6ZUM4 889 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 TPCN2Q8NHX9 752 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 ACTRT1Q8TDG2 376 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 JMJD4Q9H9V9 463 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 NR2E1Q9Y466 385 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 SPATA31A1Q5TZJ5 1347 aa12.83□□□□□ -0.36
PDZRN3-203ENST00000462146 GMNCA6NCL1 334 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 PGRMC1O00264 195 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 DNM1LO00429 736 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 KRIT1O00522 736 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 MED24O75448 989 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 AKR1B1P15121 316 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 RFC4P35249 363 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 COPB2P35606 906 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 USP8P40818 1118 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 GSCP56915 257 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 ODF2Q5BJF6 829 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 DCAF17Q5H9S7 520 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 CCDC65Q8IXS2 484 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 ADGRF4Q8IZF3 695 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 C1orf131Q8NDD1 294 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 TRIM51Q9BSJ1 452 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 LRRC27Q9C0I9 530 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 SLC40A1Q9NP59 571 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 KLC4Q9NSK0 619 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 BHMG1C9JSJ3 638 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 TRAPPC3O43617 180 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 CLSTN1O94985 981 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 CLK2P49760 499 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 PICALMQ13492 652 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 CUL1Q13616 776 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 FOXR2Q6PJQ5 311 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 ADAT2Q7Z6V5 191 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms