RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 NFRKBQ6P4R8 1299 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 TRIM50Q86XT4 487 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 FBXO18Q8NFZ0 1043 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 DDX12PQ92771 950 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 GLG1Q92896 1179 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 BADQ92934 168 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 TNFRSF25Q93038 417 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 GJA10Q969M2 543 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 LENG9Q96B70 501 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 LBHD1Q9BQE6 289 aaPredicted RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 TUT1Q9H6E5 874 aaKnown RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 TBC1D22BQ9NU19 505 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 TRMT13Q9NUP7 481 aaKnown RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 DDX25Q9UHL0 483 aaKnown RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 NOD1Q9Y239 953 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 KIF3AQ9Y496 699 aa11.42□□□□□ -0.58
RFX3-210ENST00000457373 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.42□□□□□ -0.58
RFX3-210ENST00000457373 CYP3A7-CYP3A51PA0A087WV96 503 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 KIAA0355O15063 1070 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 MARCH6O60337 910 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 SUPT20HL2P0C7V6 817 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 CYP2C9P11712 490 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 ATP2B1P20020 1258 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 CYP3A7P24462 503 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 ITGB8P26012 769 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 MARK3P27448 753 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 MAGEA10P43363 369 aaPredicted RBP11.41□□□□□ -0.58
RFX3-210ENST00000457373 PTGISQ16647 500 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 GDF6Q6KF10 455 aaPredicted RBP11.41□□□□□ -0.58
RFX3-210ENST00000457373 MOXD1Q6UVY6 613 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 NAP1L4Q99733 375 aaKnown RBP11.41□□□□□ -0.58
RFX3-210ENST00000457373 TEKT3Q9BXF9 490 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 SMARCAD1Q9H4L7 1026 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 TCEAL9Q9UHQ7 104 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 ZNF215Q9UL58 517 aaPredicted RBP11.41□□□□□ -0.58
RFX3-210ENST00000457373 LTBP2Q14767 1821 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 PDE4DIPQ5VU43 2346 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 BRCA2P51587 3418 aa11.41□□□□□ -0.58
RFX3-210ENST00000457373 C17orf102A2RUQ5 167 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 BACH1O14867 736 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 CHMP2AO43633 222 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 SLC37A4O43826 429 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 GAS7O60861 476 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 ATG7O95352 703 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 CCNE2O96020 404 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 SMIM10L2AP0DMW4 78 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 SMIM10L2BP0DMW5 78 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 STAT5BP51692 787 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 ZNF200P98182 395 aaPredicted RBP11.4□□□□□ -0.58
RFX3-210ENST00000457373 CUL4AQ13619 759 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 LRCH2Q5VUJ6 765 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 PPP4R3AQ6IN85 833 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 MIS18BP1Q6P0N0 1132 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 ABHD15Q6UXT9 468 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 SLC5A5Q92911 643 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 MBOAT7Q96N66 472 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 PCYT2Q99447 389 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 ARID3AQ99856 593 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 RNPEPQ9H4A4 650 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 OCEL1Q9H607 264 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 AZI2Q9H6S1 392 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 GTF2IRD1Q9UHL9 959 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 TBX21Q9UL17 535 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 COLQQ9Y215 455 aaPredicted RBP11.4□□□□□ -0.58
RFX3-210ENST00000457373 SAMM50Q9Y512 469 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 WDR81Q562E7 1941 aa11.4□□□□□ -0.58
RFX3-210ENST00000457373 MYH9P35579 1960 aaKnown RBP11.39□□□□□ -0.59
RFX3-210ENST00000457373 UMODL1Q5DID0 1318 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 KIF28PB7ZC32 967 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 H3BQV1 296 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 K7ELQ4 463 aaPredicted RBP11.39□□□□□ -0.59
RFX3-210ENST00000457373 LGR5O75473 907 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 TIMP1P01033 207 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 GCFC2P16383 781 aaKnown RBP11.39□□□□□ -0.59
RFX3-210ENST00000457373 CYP2C18P33260 490 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 CCL23P55773 120 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 KRT76Q01546 638 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 PTGDRQ13258 359 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 FAM160B1Q5W0V3 765 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 LARP1BQ659C4 914 aaKnown RBP11.39□□□□□ -0.59
RFX3-210ENST00000457373 MCTP1Q6DN14 999 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 ZNF746Q6NUN9 644 aaPredicted RBP11.39□□□□□ -0.59
RFX3-210ENST00000457373 SWSAP1Q6NVH7 229 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 TRMT1LQ7Z2T5 733 aaKnown RBP11.39□□□□□ -0.59
RFX3-210ENST00000457373 SESTD1Q86VW0 696 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 RIT2Q99578 217 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 GDF15Q99988 308 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 UBE2OQ9C0C9 1292 aaKnown RBP11.39□□□□□ -0.59
RFX3-210ENST00000457373 FOXP1Q9H334 677 aaPredicted RBP11.39□□□□□ -0.59
RFX3-210ENST00000457373 UNC45AQ9H3U1 944 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 HIPK3Q9H422 1215 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 ZNF302Q9NR11 478 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 SETD4Q9NVD3 440 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 ERAP1Q9NZ08 941 aa11.39□□□□□ -0.59
RFX3-210ENST00000457373 WNT7AO00755 349 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 TREHO43280 583 aa11.38□□□□□ -0.59
RFX3-210ENST00000457373 PSMD10O75832 226 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms