RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SLC35G1Q2M3R5 365 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 EP400NLQ6ZTU2 488 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 PEX26Q7Z412 305 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 CCDC63Q8NA47 563 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 PROCA1Q8NCQ7 364 aaPredicted RBP14.98□□□□□ -0.01
PTPRE-204ENST00000455661 TLCD1Q96CP7 247 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 HOOK2Q96ED9 719 aa14.98□□□□□ -0.01
PTPRE-204ENST00000455661 TRIM6Q9C030 488 aaPredicted RBP14.98□□□□□ -0.01
PTPRE-204ENST00000455661 SLIT2O94813 1529 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 DCDC2CA8MYV0 355 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 KLRF2D3W0D1 207 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 F8W031 263 aaPredicted RBP14.97□□□□□ -0.01
PTPRE-204ENST00000455661 ASAP2O43150 1006 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
PTPRE-204ENST00000455661 RPSAP08865 295 aaKnown RBP14.97□□□□□ -0.01
PTPRE-204ENST00000455661 ITIH4Q14624 930 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 SEPT2Q15019 361 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 SLC4A8Q2Y0W8 1093 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 ZCWPW2Q504Y3 356 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 SYCE1Q8N0S2 351 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 CCHCR1Q8TD31 782 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 SNX29Q8TEQ0 813 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 TBC1D31Q96DN5 1066 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 USP17L8P0C7I0 530 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 CALRP27797 417 aaKnown RBP14.97□□□□□ -0.01
PTPRE-204ENST00000455661 SATB1Q01826 763 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 PTK2Q05397 1052 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 COASYQ13057 564 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 CRELD2Q6UXH1 353 aaPredicted RBP14.97□□□□□ -0.01
PTPRE-204ENST00000455661 CADPS2Q86UW7 1296 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 TRIM59Q8IWR1 403 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 ZNF444Q8N0Y2 327 aaPredicted RBP14.97□□□□□ -0.01
PTPRE-204ENST00000455661 RASGEF1CQ8N431 466 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 LRRC57Q8N9N7 239 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 FAM84BQ96KN1 310 aaPredicted RBP14.97□□□□□ -0.01
PTPRE-204ENST00000455661 MTMR9Q96QG7 549 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 SPAG5Q96R06 1193 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 SPZ1Q9BXG8 430 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 BMP2KQ9NSY1 1161 aaPredicted RBP14.97□□□□□ -0.01
PTPRE-204ENST00000455661 SAMD15Q9P1V8 674 aa14.97□□□□□ -0.01
PTPRE-204ENST00000455661 SEC63Q9UGP8 760 aaKnown RBP14.97□□□□□ -0.01
PTPRE-204ENST00000455661 CCDC189A1A4V9 331 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 CFAP73A6NFT4 308 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 TTI1O43156 1089 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 GOLGA8HP0CJ92 632 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 MARSP56192 900 aaKnown RBP14.96□□□□□ -0.01
PTPRE-204ENST00000455661 PDIA5Q14554 519 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 FAM26FQ5R3K3 315 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 REXO1Q8N1G1 1221 aaKnown RBP14.96□□□□□ -0.01
PTPRE-204ENST00000455661 GLIS3Q8NEA6 775 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 MDM1Q8TC05 714 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 TBC1D22AQ8WUA7 517 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 SEC14L1Q92503 715 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 FMO2Q99518 471 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 RAB17Q9H0T7 212 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 GANQ9H2C0 597 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 DPH5Q9H2P9 285 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 PANK4Q9NVE7 773 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 BIN2Q9UBW5 565 aaPredicted RBP14.96□□□□□ -0.01
PTPRE-204ENST00000455661 STX8Q9UNK0 236 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 ATP8A1Q9Y2Q0 1164 aa14.96□□□□□ -0.01
PTPRE-204ENST00000455661 CCDC88AQ3V6T2 1871 aa14.96□□□□□ -0.02
PTPRE-204ENST00000455661 DCCP43146 1447 aa14.96□□□□□ -0.02
PTPRE-204ENST00000455661 USP17L3A6NCW0 530 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 USP17L4A6NCW7 530 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 PPP1R12AO14974 1030 aaPredicted RBP14.95□□□□□ -0.02
PTPRE-204ENST00000455661 PPP1R12BO60237 982 aaPredicted RBP14.95□□□□□ -0.02
PTPRE-204ENST00000455661 FLOT1O75955 427 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 MMEP08473 750 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 PAX7P23759 505 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 RIPK1Q13546 671 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 LRCH2Q5VUJ6 765 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 USP17L1Q7RTZ2 530 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 TPCN2Q8NHX9 752 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 FAXDC2Q96IV6 333 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 GOLPH3Q9H4A6 298 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 BATF3Q9NR55 127 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 SUCLA2Q9P2R7 463 aaPredicted RBP14.95□□□□□ -0.02
PTPRE-204ENST00000455661 PNMA2Q9UL42 364 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 MYH7BA7E2Y1 1941 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 MYH4Q9Y623 1939 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 FRMD3A2A2Y4 597 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 PPFIA2O75334 1257 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 ITGA4P13612 1032 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 CHN1P15882 459 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 PPP2R5AQ15172 486 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 PTPROQ16827 1216 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 C12orf60Q5U649 245 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 ALKBH5Q6P6C2 394 aaKnown RBP14.95□□□□□ -0.02
PTPRE-204ENST00000455661 ZNF571Q7Z3V5 609 aaPredicted RBP14.95□□□□□ -0.02
PTPRE-204ENST00000455661 VPS36Q86VN1 386 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 SELENOSQ9BQE4 189 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 TMEM47Q9BQJ4 181 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.95□□□□□ -0.02
PTPRE-204ENST00000455661 NAGPAQ9UK23 515 aa14.95□□□□□ -0.02
PTPRE-204ENST00000455661 CAND2O75155 1236 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 CLTAP09496 248 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 TCP11Q8WWU5 503 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 ZNF317Q96PQ6 595 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms