RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 ATP13A4Q4VNC1 1196 aa6.86□□□□□ -1.31
HMGB1P26-201ENST00000452520 TEPPQ6URK8 271 aa6.86□□□□□ -1.31
HMGB1P26-201ENST00000452520 C11orf74Q86VG3 221 aa6.86□□□□□ -1.31
HMGB1P26-201ENST00000452520 SCYL1Q96KG9 808 aa6.86□□□□□ -1.31
HMGB1P26-201ENST00000452520 ELF4Q99607 663 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P26-201ENST00000452520 RNF38Q9H0F5 515 aa6.86□□□□□ -1.31
HMGB1P26-201ENST00000452520 CYP17A1P05093 508 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 SDHAP31040 664 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 STAT5AP42229 794 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 NCKAP1LP55160 1127 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 CACNB2Q08289 660 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 TARBP2Q15633 366 aaKnown RBP6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 CD300LDQ6UXZ3 194 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 PASD1Q8IV76 773 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 FAM26EQ8N5C1 309 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 SGPP1Q9BX95 441 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 IRF2BPLQ9H1B7 796 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 PCIF1Q9H4Z3 704 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 NGRNQ9NPE2 291 aaKnown RBP6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 APOBEC2Q9Y235 224 aaKnown RBP6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 PCDHA5Q9Y5H7 936 aa6.85□□□□□ -1.31
HMGB1P26-201ENST00000452520 PRAMEF25A6NGN4 478 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 RASSF10A6NK89 507 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 ATF2P15336 505 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 PTX3P26022 381 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 CDR1P51861 262 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 HERVK_113P62684 666 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 NKX3-2P78367 333 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 SMAD3P84022 425 aaKnown RBP6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 DBPQ10586 325 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 SMAD2Q15796 467 aaKnown RBP6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 CATSPEREQ5SY80 951 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 FBXO15Q8NCQ5 510 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 MZB1Q8WU39 189 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 STAG1Q8WVM7 1258 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 KCNN1Q92952 543 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 DDX11Q96FC9 970 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 TOMM22Q9NS69 142 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 SLC5A4Q9NY91 659 aa6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 DDX56Q9NY93 547 aaKnown RBP6.84□□□□□ -1.31
HMGB1P26-201ENST00000452520 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 ALG1L2C9J202 215 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 FOXP2O15409 715 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 SEMA7AO75326 666 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 MC3RP41968 323 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 GUCY2FP51841 1108 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 TMPRSS15P98073 1019 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 CCDC181Q5TID7 509 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 MCTP1Q6DN14 999 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 ZC3H18Q86VM9 953 aaKnown RBP6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 SPATS2Q86XZ4 545 aaKnown RBP6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 IGDCC3Q8IVU1 814 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 GCM1Q9NP62 436 aa6.83□□□□□ -1.32
HMGB1P26-201ENST00000452520 WASHC2CQ9Y4E1 1318 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 N4BP3O15049 544 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 C8BP07358 591 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 MMEP08473 750 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 ENO2P09104 434 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 PFKLP17858 780 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 IGFBP6P24592 240 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 EPHB3P54753 998 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 DLG4P78352 724 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 TERF2Q15554 542 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 DDB1Q16531 1140 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 BROXQ5VW32 411 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 CD276Q5ZPR3 534 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 B3GNT8Q7Z7M8 397 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 PROSER1Q86XN7 944 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 ASB15Q8WXK1 588 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 SLC5A5Q92911 643 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 C16orf92Q96LL3 132 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 HOMER2Q9NSB8 354 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 RBPJLQ9UBG7 517 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 WASF3Q9UPY6 502 aa6.82□□□□□ -1.32
HMGB1P26-201ENST00000452520 GOLGA6L22H0YM25 854 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 ULK1O75385 1050 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 S100BP04271 92 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 FNTBP49356 437 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 PHC1P78364 1004 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 FAM50AQ14320 339 aaKnown RBP6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 LRRC32Q14392 662 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 GPR158Q5T848 1215 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 NECAB2Q7Z6G3 386 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 SMARCC2Q8TAQ2 1214 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 GBP4Q96PP9 640 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 SYT3Q9BQG1 590 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 ZMAT4Q9H898 229 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 BTBD7Q9P203 1132 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 CHPF2Q9P2E5 772 aa6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 G3BP2Q9UN86 482 aaKnown RBP6.81□□□□□ -1.32
HMGB1P26-201ENST00000452520 CYP2C8P10632 490 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 AOAHP28039 575 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 LSP1P33241 339 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 SESN3P58005 492 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 FOXO4P98177 505 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 PFKPQ01813 784 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 MESP2Q0VG99 397 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 FAPQ12884 760 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 EPHA7Q15375 998 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 IQSEC1Q6DN90 963 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms