RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 IRF2BP2Q7Z5L9 587 aa17.94■□□□□ 0.46
HDAC11-214ENST00000446613 LRRC57Q8N9N7 239 aa17.94■□□□□ 0.46
HDAC11-214ENST00000446613 RBM46Q8TBY0 533 aaKnown RBP17.94■□□□□ 0.46
HDAC11-214ENST00000446613 EDEM3Q9BZQ6 932 aa17.94■□□□□ 0.46
HDAC11-214ENST00000446613 RIC8AQ9NPQ8 531 aa17.94■□□□□ 0.46
HDAC11-214ENST00000446613 MYH7BA7E2Y1 1941 aa17.94■□□□□ 0.46
HDAC11-214ENST00000446613 FXR2P51116 673 aaKnown RBP eCLIP17.93■□□□□ 0.46
HDAC11-214ENST00000446613 ADAM9Q13443 819 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 HERC4Q5GLZ8 1057 aaPredicted RBP17.93■□□□□ 0.46
HDAC11-214ENST00000446613 SCFD1Q8WVM8 642 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 LUC7LQ9NQ29 371 aaKnown RBP17.93■□□□□ 0.46
HDAC11-214ENST00000446613 TPX2Q9ULW0 747 aaKnown RBP17.93■□□□□ 0.46
HDAC11-214ENST00000446613 ATP8A1Q9Y2Q0 1164 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 SMIM23A6NLE4 172 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 PARP9Q8IXQ6 854 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 N4BP2L2Q92802 583 aaPredicted RBP17.93■□□□□ 0.46
HDAC11-214ENST00000446613 AIPL1Q9NZN9 384 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 SUFUQ9UMX1 484 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 SCTRP47872 440 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 LRRC47Q8N1G4 583 aaKnown RBP17.93■□□□□ 0.46
HDAC11-214ENST00000446613 GIMAP7Q8NHV1 300 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 SYN2Q92777 582 aaPredicted RBP17.93■□□□□ 0.46
HDAC11-214ENST00000446613 HAS1Q92839 578 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 SPAG5Q96R06 1193 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 NAGPAQ9UK23 515 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 KIAA1024Q9UPX6 916 aa17.93■□□□□ 0.46
HDAC11-214ENST00000446613 PGRMC1O00264 195 aaKnown RBP17.92■□□□□ 0.46
HDAC11-214ENST00000446613 SHBGP04278 402 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 ZBTB48P10074 688 aaPredicted RBP17.92■□□□□ 0.46
HDAC11-214ENST00000446613 CDK8P49336 464 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 ALKBH5Q6P6C2 394 aaKnown RBP17.92■□□□□ 0.46
HDAC11-214ENST00000446613 TMC3Q7Z5M5 1100 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 CPLX4Q7Z7G2 160 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 ARFGAP2Q8N6H7 521 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 PNMA2Q9UL42 364 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 POTEB3A0JP26 581 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 POTECB2RU33 542 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 F8W031 263 aaPredicted RBP17.92■□□□□ 0.46
HDAC11-214ENST00000446613 LDHBP07195 334 aaKnown RBP17.92■□□□□ 0.46
HDAC11-214ENST00000446613 TMEM119Q4V9L6 283 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 POTEBQ6S5H4 581 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 LRIG3Q6UXM1 1119 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 UHMK1Q8TAS1 419 aaKnown RBP17.92■□□□□ 0.46
HDAC11-214ENST00000446613 MTFR1LQ9H019 292 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 IKZF4Q9H2S9 585 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 GPCPD1Q9NPB8 672 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 MCM8Q9UJA3 840 aa17.92■□□□□ 0.46
HDAC11-214ENST00000446613 MARCH6O60337 910 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 CUL1Q13616 776 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 PREPLQ4J6C6 727 aaPredicted RBP17.91■□□□□ 0.46
HDAC11-214ENST00000446613 TBC1D9BQ66K14 1250 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 PEX26Q7Z412 305 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 CACNA2D3Q8IZS8 1091 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 PROM2Q8N271 834 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 LRRC45Q96CN5 670 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 OSGEPQ9NPF4 335 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 ODF2LQ9ULJ1 636 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 CAND2O75155 1236 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 UCHL3P15374 230 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 SNCBQ16143 134 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 DCAF17Q5H9S7 520 aaPredicted RBP17.91■□□□□ 0.46
HDAC11-214ENST00000446613 C1orf131Q8NDD1 294 aaKnown RBP17.91■□□□□ 0.46
HDAC11-214ENST00000446613 TPCN2Q8NHX9 752 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.91■□□□□ 0.461e-7■■■□□ 15.1
HDAC11-214ENST00000446613 NUCKS1Q9H1E3 243 aaKnown RBP17.91■□□□□ 0.46
HDAC11-214ENST00000446613 KCTD10Q9H3F6 313 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 A1CFQ9NQ94 594 aaKnown RBP17.91■□□□□ 0.46
HDAC11-214ENST00000446613 PCDHA2Q9Y5H9 948 aa17.91■□□□□ 0.46
HDAC11-214ENST00000446613 SNED1Q8TER0 1413 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 NR2F2P24468 414 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 STAT3P40763 770 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 DAAM2Q86T65 1068 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 ACTRT1Q8TDG2 376 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 TATDN2Q93075 761 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 TBC1D31Q96DN5 1066 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 EMILIN3Q9NT22 766 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 KCNQ2O43526 872 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 RPSAP08865 295 aaKnown RBP17.9■□□□□ 0.46
HDAC11-214ENST00000446613 PRPF4BQ13523 1007 aaKnown RBP17.9■□□□□ 0.46
HDAC11-214ENST00000446613 NEDD9Q14511 834 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 DPY19L2P1Q6NXN4 242 aa17.9■□□□□ 0.46
HDAC11-214ENST00000446613 TLDC2A0PJX2 215 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 F8VZ95 297 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 ELF1P32519 619 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 ADCY7P51828 1080 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 PSMD2Q13200 908 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 GPBP1Q86WP2 473 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 GLG1Q92896 1179 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 HVCN1Q96D96 273 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 SGSM3Q96HU1 749 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 GOPCQ9HD26 462 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 GGT7Q9UJ14 662 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 HDAC9Q9UKV0 1011 aa17.89■□□□□ 0.46
HDAC11-214ENST00000446613 ABCA3Q99758 1704 aa17.89■□□□□ 0.45
HDAC11-214ENST00000446613 FGGP02679 453 aa17.89■□□□□ 0.45
HDAC11-214ENST00000446613 IFFO1Q0D2I5 559 aa17.89■□□□□ 0.45
HDAC11-214ENST00000446613 TCERG1LQ5VWI1 586 aa17.89■□□□□ 0.45
HDAC11-214ENST00000446613 RUFY4Q6ZNE9 571 aa17.89■□□□□ 0.45
HDAC11-214ENST00000446613 LZTS2Q9BRK4 669 aa17.89■□□□□ 0.45
HDAC11-214ENST00000446613 DDX25Q9UHL0 483 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms