RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 EXOC7Q9UPT5 735 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 LGALS16A8MUM7 142 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 NAIF1Q69YI7 327 aaPredicted RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 CC2D1AQ6P1N0 951 aaPredicted RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 HOXC10Q9NYD6 342 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 A0A087WUV0 522 aaPredicted RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 ENTPD3O75355 529 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 NR2F2P24468 414 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 CXCR5P32302 372 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 FKBP3Q00688 224 aaKnown RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 CCSER1Q9C0I3 900 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 IRAK4Q9NWZ3 460 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 CYTH3O43739 400 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 SRGAP2O75044 1071 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 RPSAP08865 295 aaKnown RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 MAATS1Q7Z4T9 603 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 ADSSL1Q8N142 457 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 WDR11Q9BZH6 1224 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 TSGA10Q9BZW7 698 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 PCIF1Q9H4Z3 704 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 FAM204AQ9H8W3 233 aa11.57□□□□□ -0.56
TOP3B-210ENST00000444502 NHEJ1Q9H9Q4 299 aaPredicted RBP11.57□□□□□ -0.56
TOP3B-210ENST00000444502 ANKRD62A6NC57 917 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 MYL1P05976 194 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 XRCC5P13010 732 aaKnown RBP11.56□□□□□ -0.56
TOP3B-210ENST00000444502 EIF4A3P38919 411 aaKnown RBP11.56□□□□□ -0.56
TOP3B-210ENST00000444502 MTMR1Q13613 665 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 MAN2A1Q16706 1144 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 NBPF12Q5TAG4 269 aaPredicted RBP11.56□□□□□ -0.56
TOP3B-210ENST00000444502 AFAP1L1Q8TED9 768 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 ATP6V0A1Q93050 837 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 NOX5Q96PH1 765 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 EMILIN3Q9NT22 766 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 TFR2Q9UP52 801 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 PRPF6O94906 941 aaKnown RBP11.56□□□□□ -0.56
TOP3B-210ENST00000444502 OSTNP61366 133 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 ZBED6P86452 979 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 RABGGTAQ92696 567 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 CSPG5O95196 566 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 H2AFXP16104 143 aaPredicted RBP11.56□□□□□ -0.56
TOP3B-210ENST00000444502 UNC13DQ70J99 1090 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 ZNF384Q8TF68 577 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 POMGNT1Q8WZA1 660 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 ZMYND12Q9H0C1 365 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 FAM49AQ9H0Q0 323 aaPredicted RBP11.56□□□□□ -0.56
TOP3B-210ENST00000444502 PRR12Q9ULL5 1215 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 AKT3Q9Y243 479 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 ADAMTSL3P82987 1691 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 PDE4DIPQ5VU43 2346 aa11.56□□□□□ -0.56
TOP3B-210ENST00000444502 POTEFA5A3E0 1075 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 M0QZ92 97 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 ZEB2O60315 1214 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 GYPCP04921 128 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 TGFB2P61812 414 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 DMP1Q13316 513 aaPredicted RBP11.55□□□□□ -0.56
TOP3B-210ENST00000444502 MAP1SQ66K74 1059 aaPredicted RBP11.55□□□□□ -0.56
TOP3B-210ENST00000444502 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 EGFL6Q8IUX8 553 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 ZFPM1Q8IX07 1006 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 AGPAT5Q9NUQ2 364 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 FEM1BQ9UK73 627 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 ODF2LQ9ULJ1 636 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 GRIN3BO60391 1043 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
TOP3B-210ENST00000444502 AMIGO3Q86WK7 504 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 CCDC125Q86Z20 511 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 REXO1L1PQ8IX06 675 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 CCDC113Q9H0I3 377 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 DDX4Q9NQI0 724 aaKnown RBP11.55□□□□□ -0.56
TOP3B-210ENST00000444502 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.55□□□□□ -0.56
TOP3B-210ENST00000444502 HDAC6Q9UBN7 1215 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 TRIM10Q9UDY6 481 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 A0A1B0GUA9 196 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 hCG_1984214I3L0E3 225 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 SRGAP2CP0DJJ0 459 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 CCND2P30279 289 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 SESTD1Q86VW0 696 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 KLHL7Q8IXQ5 586 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 KIRREL3Q8IZU9 778 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 ZNF713Q8N859 430 aaPredicted RBP11.55□□□□□ -0.56
TOP3B-210ENST00000444502 ZNF280CQ8ND82 737 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 AGBL3Q8NEM8 1001 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 PNMA2Q9UL42 364 aa11.55□□□□□ -0.56
TOP3B-210ENST00000444502 MYMKA6NI61 221 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 TAL1P17542 331 aaPredicted RBP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 TM4SF1P30408 202 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 KLK7P49862 253 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 PLCB3Q01970 1234 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 TUBB2AQ13885 445 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 E2F5Q15329 346 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 VWA3BQ502W6 1294 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 ZBTB8OSQ8IWT0 167 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 NLRP4Q96MN2 994 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms