RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 FAM90A27PA6NNH2 459 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 GSG1L2A8MUP6 293 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 M0R2C6 588 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 CBX4O00257 560 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 KCNK3O14649 394 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 PDE8AO60658 829 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 FAHP16930 419 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 KRT15P19012 456 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 GJA4P35212 333 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 ADAM9Q13443 819 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 RTP5Q14D33 572 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 ARHGAP44Q17R89 818 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 PAN2Q504Q3 1202 aaKnown RBP5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 RNF187Q5TA31 235 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 HHIPL2Q6UWX4 724 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 KIF18BQ86Y91 864 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 C2orf69Q8N8R5 385 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 LINC01356Q8N9X3 169 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 KYQ8NBH2 561 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 PCDH18Q9HCL0 1135 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 SBNO2Q9Y2G9 1366 aa5.24□□□□□ -1.57
TRAPPC13-204ENST00000438419 SLC12A8A0AV02 714 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 SH3D21A4FU49 640 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 KPNA6O60684 536 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 TRIM13O60858 407 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 THBS2P35442 1172 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 SOX5P35711 763 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 MASP1P48740 699 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 MECP2P51608 486 aaKnown RBP5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 SEC23AQ15436 765 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 FSTL4Q6MZW2 842 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 LIPIQ6XZB0 460 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 THNSL2Q86YJ6 484 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 ATP23Q9Y6H3 246 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 FAM83GA6ND36 823 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 CLASP2O75122 1294 aaKnown RBP5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 STAT3P40763 770 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 PRR31Q5SQ13 230 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 BTBD8Q5XKL5 378 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 TMC5Q6UXY8 1006 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 DBX2Q6ZNG2 339 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 OTOP1Q7RTM1 612 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 MARCH10Q8NA82 808 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 CHAC2Q8WUX2 184 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 BOCQ9BWV1 1114 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 CAAP1Q9H8G2 361 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 SPC25Q9HBM1 224 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 B4GALT6Q9UBX8 382 aa5.23□□□□□ -1.57
TRAPPC13-204ENST00000438419 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 DNAJC6O75061 913 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 HIP1RO75146 1068 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 VIL1P09327 827 aaKnown RBP5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 PTPN1P18031 435 aaKnown RBP5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 SLURP1P55000 103 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 CD276Q5ZPR3 534 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 KRT26Q7Z3Y9 468 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 RNF180Q86T96 592 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 NOSTRINQ8IVI9 506 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 TTLL6Q8N841 843 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 ZSWIM3Q96MP5 696 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 KCNC2Q96PR1 638 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 MTFR1LQ9H019 292 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 ZKSCAN5Q9Y2L8 839 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 ADAMTS20P59510 1910 aa5.22□□□□□ -1.57
TRAPPC13-204ENST00000438419 PTPDC1A2A3K4 754 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 TRAF5O00463 557 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 GAS7O60861 476 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 C4BPAP04003 597 aaKnown RBP5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 BMP7P18075 431 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 CTSWP56202 376 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 IRF9Q00978 393 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 PCBP1Q15365 356 aaKnown RBP eCLIP5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 PHF19Q5T6S3 580 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 PKN3Q6P5Z2 889 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 FILIP1Q7Z7B0 1213 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 CARFQ8N187 725 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 DTX3Q8N9I9 347 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 OR2W6PQ8NHA6 318 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 RIC8BQ9NVN3 520 aa5.21□□□□□ -1.58
TRAPPC13-204ENST00000438419 H7C1D1 291 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 SCDO00767 359 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 F2P00734 622 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 ZBTB48P10074 688 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 RPL13P26373 211 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 SARSP49591 514 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 SCNN1BP51168 640 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 MLLT6P55198 1093 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 PFKPQ01813 784 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 DBPQ10586 325 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 SART3Q15020 963 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 DHCR24Q15392 516 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 CT47A1Q5JQC4 288 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 CPZQ66K79 652 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 ZNF662Q6ZS27 426 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 SYT8Q8NBV8 401 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 LEO1Q8WVC0 666 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 TMEM209Q96SK2 561 aa5.2□□□□□ -1.58
TRAPPC13-204ENST00000438419 SPATA25Q9BR10 227 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms