RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 IRF2BPLQ9H1B7 796 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 MLXIPQ9HAP2 919 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 RTEL1Q9NZ71 1219 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 CCDC196A0A1B0GTZ2 297 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 H3BNC9 293 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 RBAK-RBAKDNI3L0D1 243 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 STXBP3O00186 592 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 NOP56O00567 594 aaKnown RBP14.57□□□□□ -0.08
SGCE-203ENST00000425444 NCK2O43639 380 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 MRPS9P82933 396 aaKnown RBP14.57□□□□□ -0.08
SGCE-203ENST00000425444 CELF3Q5SZQ8 465 aaKnown RBP14.57□□□□□ -0.08
SGCE-203ENST00000425444 MYSM1Q5VVJ2 828 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 WWC2Q6AWC2 1192 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 NLRX1Q86UT6 975 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 MYOCDQ8IZQ8 938 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 SAMD11Q96NU1 681 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 INPP4AQ96PE3 977 aaPredicted RBP14.57□□□□□ -0.08
SGCE-203ENST00000425444 EHMT1Q9H9B1 1298 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 MICAL3Q7RTP6 2002 aa14.57□□□□□ -0.08
SGCE-203ENST00000425444 hCG_1984214I3L0E3 225 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 FIBPO43427 364 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 MBTPS2O43462 519 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 EPB41L2O43491 1005 aaKnown RBP14.56□□□□□ -0.08
SGCE-203ENST00000425444 CKBP12277 381 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 CDC27P30260 824 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 PSEN2P49810 448 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 HSDL1Q3SXM5 330 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 PCNX4Q63HM2 1172 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 GDF6Q6KF10 455 aaPredicted RBP14.56□□□□□ -0.08
SGCE-203ENST00000425444 PPP1R18Q6NYC8 613 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 XRRA1Q6P2D8 792 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.56□□□□□ -0.08
SGCE-203ENST00000425444 ZNF713Q8N859 430 aaPredicted RBP14.56□□□□□ -0.08
SGCE-203ENST00000425444 C7orf31Q8N865 590 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 DHX38Q92620 1227 aaKnown RBP14.56□□□□□ -0.08
SGCE-203ENST00000425444 CTAGE1Q96RT6 745 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 ALG1Q9BT22 464 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 V9GY48 417 aaPredicted RBP14.56□□□□□ -0.08
SGCE-203ENST00000425444 ACACBO00763 2458 aa14.56□□□□□ -0.08
SGCE-203ENST00000425444 KMT2EQ8IZD2 1858 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 F2P00734 622 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 AMHP03971 560 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 ICAM3P32942 547 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 ADD1P35611 737 aaKnown RBP14.55□□□□□ -0.08
SGCE-203ENST00000425444 HTRA4P83105 476 aaPredicted RBP14.55□□□□□ -0.08
SGCE-203ENST00000425444 ZXDAP98168 799 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 SP2Q02086 613 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 DLX2Q07687 328 aaPredicted RBP14.55□□□□□ -0.08
SGCE-203ENST00000425444 SMAD4Q13485 552 aaKnown RBP14.55□□□□□ -0.08
SGCE-203ENST00000425444 NEDD9Q14511 834 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 MFSD10Q14728 455 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 KIAA0753Q2KHM9 967 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 TMEM192Q8IY95 271 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 SP7Q8TDD2 431 aaPredicted RBP14.55□□□□□ -0.08
SGCE-203ENST00000425444 KAT2BQ92831 832 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 ALG13Q9NP73 1137 aaKnown RBP14.55□□□□□ -0.08
SGCE-203ENST00000425444 PCDHA6Q9UN73 950 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 PCDHA8Q9Y5H6 950 aa14.55□□□□□ -0.08
SGCE-203ENST00000425444 SPATA31C2B4DYI2 1134 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 H0Y858 1186 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 PPFIA4O75335 1185 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 ADCY7P51828 1080 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 VCPP55072 806 aaKnown RBP14.54□□□□□ -0.08
SGCE-203ENST00000425444 AKAP17AQ02040 695 aaKnown RBP14.54□□□□□ -0.08
SGCE-203ENST00000425444 SP4Q02446 784 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 FUT2Q10981 343 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 CTC1Q2NKJ3 1217 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 CYFIP1Q7L576 1253 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 ASCL5Q7RTU5 278 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 CDHR1Q96JP9 859 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 YME1L1Q96TA2 773 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 TLR9Q9NR96 1032 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 FAM217BQ9NTX9 383 aaPredicted RBP14.54□□□□□ -0.08
SGCE-203ENST00000425444 BARHL2Q9NY43 387 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 CYP46A1Q9Y6A2 500 aa14.54□□□□□ -0.08
SGCE-203ENST00000425444 NID2Q14112 1375 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 SMCO2A6NFE2 343 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 LGR5O75473 907 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 ID4P47928 161 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 RBL2Q08999 1139 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 SEMA3FQ13275 785 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 TYW1BQ6NUM6 668 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 METTL7BQ6UX53 244 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 RUFY3Q7L099 469 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 SESTD1Q86VW0 696 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 FBXL16Q8N461 479 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 GPRASP2Q96D09 838 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 PGBD1Q96JS3 809 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 USP26Q9BXU7 913 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 RIC8AQ9NPQ8 531 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 HDAC6Q9UBN7 1215 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 GTF2IRD1Q9UHL9 959 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 CHD8Q9HCK8 2581 aa14.53□□□□□ -0.08
SGCE-203ENST00000425444 PLXNA3P51805 1871 aa14.52□□□□□ -0.08
SGCE-203ENST00000425444 CHD6Q8TD26 2715 aa14.52□□□□□ -0.08
SGCE-203ENST00000425444 LGALS2P05162 132 aa14.52□□□□□ -0.09
SGCE-203ENST00000425444 HOXD8P13378 290 aaPredicted RBP14.52□□□□□ -0.09
SGCE-203ENST00000425444 SCG2P13521 617 aa14.52□□□□□ -0.09
SGCE-203ENST00000425444 AVPR2P30518 371 aa14.52□□□□□ -0.09
SGCE-203ENST00000425444 CCT2P78371 535 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 1276.2 ms