RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 DTHD1Q6ZMT9 781 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 KIAA0895Q8NCT3 520 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 EPS8L3Q8TE67 593 aaKnown RBP12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 DYDC1Q8WWB3 177 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 BAP1Q92560 729 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 LRRC45Q96CN5 670 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 SYT15Q9BQS2 421 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 RNF26Q9BY78 433 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 PPP1R12CQ9BZL4 782 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 ASAP1Q9ULH1 1129 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 AFDNP55196 1824 aaKnown RBP12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 F8VZ95 297 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 RTN3O95197 1032 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 CCNE1P24864 410 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 MEI1Q5TIA1 1274 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 DAAM2Q86T65 1068 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 ANKRD42Q8N9B4 389 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 CCHCR1Q8TD31 782 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 TNFRSF25Q93038 417 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 NAF1Q96HR8 494 aaKnown RBP12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 TMEM237Q96Q45 408 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 TMX4Q9H1E5 349 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 BIRC3Q13489 604 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 BLMHQ13867 455 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 SEPT14Q6ZU15 432 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 MIGA2Q7L4E1 593 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 TTLL11Q8NHH1 800 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 PIGBQ92521 554 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 PAIP2Q9BPZ3 127 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 ARPP21Q9UBL0 812 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 NOC2LQ9Y3T9 749 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 TULP1O00294 542 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 MSH2P43246 934 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 FUT2Q10981 343 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 LAMB3Q13751 1172 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 ZNF268Q14587 947 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 ADGRA1Q86SQ6 560 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 NRAPQ86VF7 1730 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 MFN1Q8IWA4 741 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 KLHL23Q8NBE8 558 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 ERGIC2Q96RQ1 377 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 RPS6KC1Q96S38 1066 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 ADAM7Q9H2U9 754 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 TOGARAM1Q9Y4F4 1720 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 RHOBTB3O94955 611 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 FGFR4P22455 802 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 TECP42680 631 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 KCNMA1Q12791 1236 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 ZNF211Q13398 564 aaPredicted RBP12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 SLC29A2Q14542 456 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 UBE3CQ15386 1083 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 METTL13Q8N6R0 699 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 CNBD1Q8NA66 436 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 PHC3Q8NDX5 983 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 CNNM2Q9H8M5 875 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 C2CD2Q9Y426 696 aa12.3□□□□□ -0.44
SEC61A1-202ENST00000424880 MYH2Q9UKX2 1941 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 A6NHS1 94 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 WTIPA6NIX2 430 aaPredicted RBP12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 TCP11X1B4DZS4 312 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 ACTN1P12814 892 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 RFC5P40937 340 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 RASGRF1Q13972 1273 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 ASTE1Q2TB18 679 aaPredicted RBP12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 NUGGCQ68CJ6 796 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 ANO7Q6IWH7 933 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 AADACL2Q6P093 401 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 CCDC25Q86WR0 208 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 FITM2Q8N6M3 262 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 TEKT4Q8WW24 435 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 ANKS1AQ92625 1134 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 EPAS1Q99814 870 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 KCNMB3Q9NPA1 279 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 RGS17Q9UGC6 210 aaPredicted RBP12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 SNX24Q9Y343 169 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 CIAO1O76071 339 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 PDIA5Q14554 519 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 TNIP1Q15025 636 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 CATIPQ7Z7H3 387 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 RMDN2Q96LZ7 410 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 TRIM9Q9C026 710 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 DNAJC17Q9NVM6 304 aaKnown RBP12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 SWAP70Q9UH65 585 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
SEC61A1-202ENST00000424880 GH1P01241 217 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 ARID4AP29374 1257 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 NAB2Q15742 525 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 SLC9C1Q4G0N8 1177 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 FAM83BQ5T0W9 1011 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 CWF19L1Q69YN2 538 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 PDXDC1Q6P996 788 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms