RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	WASF2	Q9Y6W5	498 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SPTBN2	O15020	2390 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	BAHCC1	Q9P281	2608 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	TTLL1	O95922	423 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CTSH	P09668	335 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RLBP1	P12271	317 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	THPO	P40225	353 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PTK7	Q13308	1070 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PKN1	Q16512	942 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SBK1	Q52WX2	424 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	TMED8	Q6PL24	325 aa	Predicted RBP	10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SEPT14	Q6ZU15	432 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SMRP1	Q8NCR6	262 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RHPN1	Q8TCX5	695 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SAMD11	Q96NU1	681 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	MYO10	Q9HD67	2058 aa		10.25	□□□□□ -0.77
NIF3L1-206	ENST00000416651	KIAA1671	Q9BY89	1806 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RSPH10B2	B2RC85	870 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	HAS3	O00219	553 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PER2	O15055	1255 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	KPNA6	O60684	536 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RSPH10B	P0C881	870 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SLC1A4	P43007	532 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RPS6	P62753	249 aa	Known RBP	10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PDE4D	Q08499	809 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PTPN21	Q16825	1174 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	KIAA0753	Q2KHM9	967 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CEP85	Q6P2H3	762 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	FAM160B2	Q86V87	743 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	AMOTL1	Q8IY63	956 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	FEZF2	Q8TBJ5	459 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SCFD2	Q8WU76	684 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CHURC1	Q8WUH1	139 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	IFIH1	Q9BYX4	1025 aa	Known RBP	10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	BCAS3	Q9H6U6	928 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RC3H2	Q9HBD1	1191 aa	Known RBP	10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	IL17RB	Q9NRM6	502 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	COL20A1	Q9P218	1284 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PCDHGC3	Q9UN70	934 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CEP250	Q9BV73	2442 aa		10.24	□□□□□ -0.77
NIF3L1-206	ENST00000416651	MYH7	P12883	1935 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ACACB	O00763	2458 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	C5orf67	F2Z3F1	127 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	NKRF	O15226	690 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PI15	O43692	258 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	EFCAB14	O75071	495 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	BRD1	O95696	1058 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ICAM1	P05362	532 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ITGB1	P05556	798 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ICAM3	P32942	547 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	NRIP1	P48552	1158 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	TFAP4	Q01664	338 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	BRDT	Q58F21	947 aa	Predicted RBP	10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RCSD1	Q6JBY9	416 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	KIAA2013	Q8IYS2	634 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	FIBCD1	Q8N539	461 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	C7orf31	Q8N865	590 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	NEDD1	Q8NHV4	660 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	NKD2	Q969F2	451 aa	Predicted RBP	10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	OSBP2	Q969R2	916 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	GMCL1	Q96IK5	515 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PHF7	Q9BWX1	381 aa	Predicted RBP	10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RANBP17	Q9H2T7	1088 aa	Known RBP	10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ADD3	Q9UEY8	706 aa	Known RBP	10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PLAGL2	Q9UPG8	496 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	TELO2	Q9Y4R8	837 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	MYH7B	A7E2Y1	1941 aa		10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	MAP1B	P46821	2468 aa	Known RBP	10.23	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CHD6	Q8TD26	2715 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651		M0R2C6	588 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	TREH	O43280	583 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	COASY	Q13057	564 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	UBE3C	Q15386	1083 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RNF207	Q6ZRF8	634 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	DGLUCY	Q7Z3D6	616 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SPPL3	Q8TCT6	385 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SPIRE2	Q8WWL2	714 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SUSD6	Q92537	303 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	IL17RA	Q96F46	866 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ZFP42	Q96MM3	310 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	TAAR1	Q96RJ0	339 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CPVL	Q9H3G5	476 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CFAP47	Q6ZTR5	3102 aa		10.22	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PLXNA4	Q9HCM2	1894 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	NCK2	O43639	380 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PLA2G6	O60733	806 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PARN	O95453	639 aa	Known RBP	10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	GH1	P01241	217 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	MMP1	P03956	469 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	GATM	P50440	423 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SERINC5	Q86VE9	423 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	DCLK2	Q8N568	766 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	EFHB	Q8N7U6	833 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	KREMEN2	Q8NCW0	462 aa		10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.21	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SEC62	Q99442	399 aa	Known RBP	10.21	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms