RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 GGT6Q6P531 493 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 APOA5Q6Q788 366 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 LRRTM4Q86VH4 590 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 PPFIBP1Q86W92 1011 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 NBPF5PQ86XG9 351 aaPredicted RBP6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 ZMIZ2Q8NF64 920 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 ANKK1Q8NFD2 765 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 DPF3Q92784 378 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 NXPE3Q969Y0 559 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 KLHL25Q9H0H3 589 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 DEF6Q9H4E7 631 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 SCUBE2Q9NQ36 999 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 CYP26B1Q9NR63 512 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 WDR35Q9P2L0 1181 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 KLHL3Q9UH77 587 aa6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 HERC5Q9UII4 1024 aaKnown RBP6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 ZHX1Q9UKY1 873 aaPredicted RBP6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 RRP15Q9Y3B9 282 aaKnown RBP6.65□□□□□ -1.34
CBX1P3-201ENST00000413296 SOS1Q07889 1333 aaPredicted RBP6.65□□□□□ -1.35
CBX1P3-201ENST00000413296 A0A1W2PPH5 198 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 SOWAHBA6NEL2 793 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 PGPEP1LA6NFU8 196 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 CAPN8A6NHC0 703 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 GFRA2O00451 464 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 TADA3O75528 432 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 STARD3NLO95772 234 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 KRT1P04264 644 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 ZBTB48P10074 688 aaPredicted RBP6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 STMN1P16949 149 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 PDIA3P30101 505 aaKnown RBP6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 PTGIRP43119 386 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 MRE11P49959 708 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 FXR1P51114 621 aaKnown RBP eCLIP6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 MRPS35P82673 323 aaKnown RBP6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 GUCY1A3Q02108 690 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 MAP4K2Q12851 820 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 SCARB2Q14108 478 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 KRT32Q14532 448 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 PLCL1Q15111 1095 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 TXNDC11Q6PKC3 985 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 MFSD6Q6ZSS7 791 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 TTLL7Q6ZT98 887 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 ADAT2Q7Z6V5 191 aaKnown RBP6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 ERCC4Q92889 916 aaPredicted RBP6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 ATP2A3Q93084 1043 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 MRGPRX3Q96LB0 322 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 JAKMIP1Q96N16 626 aaKnown RBP6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 NCAPGQ9BPX3 1015 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 SLF1Q9BQI6 1058 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 MAGEH1Q9H213 219 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 CCM2LQ9NUG4 571 aaPredicted RBP6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 DACT1Q9NYF0 836 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 SIK3Q9Y2K2 1263 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 SNX13Q9Y5W8 968 aa6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 AQRO60306 1485 aaKnown RBP eCLIP6.64□□□□□ -1.35
CBX1P3-201ENST00000413296 INO80B-WBP1J3KQ70 363 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 HOXC11O43248 304 aaPredicted RBP6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 USO1O60763 962 aaKnown RBP6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 B3GALNT1O75752 331 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 WIZO95785 1651 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 ALOX12P18054 663 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 KCNJ6P48051 423 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 YARSP54577 528 aaKnown RBP6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 HYAL2Q12891 473 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 NR5A1Q13285 461 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 PDE3AQ14432 1141 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 POLD3Q15054 466 aaPredicted RBP6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 PPP2R5BQ15173 497 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 ASIC2Q16515 512 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 ANO6Q4KMQ2 910 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 WIPI1Q5MNZ9 446 aaPredicted RBP6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 COL13A1Q5TAT6 717 aaPredicted RBP6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 USP45Q70EL2 814 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 ASXL2Q76L83 1435 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 DZIP1LQ8IYY4 767 aaKnown RBP6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 GALNT15Q8N3T1 639 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 CHST14Q8NCH0 376 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 FAM13CQ8NE31 585 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 LMBR1Q8WVP7 490 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 DESI2Q9BSY9 194 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 SORBS1Q9BX66 1292 aaKnown RBP6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 TXLNGYQ9BZA5 131 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 BTBD1Q9H0C5 482 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 GRPEL1Q9HAV7 217 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 ORC3Q9UBD5 711 aaPredicted RBP6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 DENND2AQ9ULE3 1009 aa6.63□□□□□ -1.35
CBX1P3-201ENST00000413296 USP19O94966 1318 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 DOK2O60496 412 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 SOAT2O75908 522 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 FGF18O76093 207 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 THP07101 528 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 SELPP16109 830 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 ATP4AP20648 1035 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 PDCP20941 246 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 AGFG1P52594 562 aaKnown RBP6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 NR1H2P55055 460 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 ZNF543Q08ER8 600 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 ZACNQ401N2 412 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 METTL24Q5JXM2 366 aa6.62□□□□□ -1.35
CBX1P3-201ENST00000413296 TMEM201Q5SNT2 666 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms