RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 C15orf59Q2T9L4 293 aaPredicted RBP6.28□□□□□ -1.4
CNGA1-202ENST00000402813 TMEM57Q8N5G2 664 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 ANKRD24Q8TF21 1146 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 ZNF296Q8WUU4 475 aaPredicted RBP6.28□□□□□ -1.4
CNGA1-202ENST00000402813 C1orf112Q9NSG2 853 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 SIRT5Q9NXA8 310 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 MCM9Q9NXL9 1143 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 AGO2Q9UKV8 859 aaKnown RBP6.28□□□□□ -1.4
CNGA1-202ENST00000402813 ATP11BQ9Y2G3 1177 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 CAB39Q9Y376 341 aaPredicted RBP6.28□□□□□ -1.4
CNGA1-202ENST00000402813 MAP4K5Q9Y4K4 846 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 REREQ9P2R6 1566 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 PREX2Q70Z35 1606 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 CDC42BPAQ5VT25 1732 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 FZD9O00144 591 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 ENDOD1O94919 500 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 ATP5F1P24539 256 aaPredicted RBP6.28□□□□□ -1.4
CNGA1-202ENST00000402813 PSMA4P25789 261 aaKnown RBP6.28□□□□□ -1.4
CNGA1-202ENST00000402813 ETV1P50549 477 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 CCNA1P78396 465 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 SGCGQ13326 291 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 ADAM15Q13444 863 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 TSGA10IPQ3SY00 556 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 FNDC3BQ53EP0 1204 aaKnown RBP6.28□□□□□ -1.4
CNGA1-202ENST00000402813 CEP55Q53EZ4 464 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 OTUD7BQ6GQQ9 843 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 C11orf88Q6PI97 169 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 LPCAT2Q7L5N7 544 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 TMTC1Q8IUR5 882 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 EFCAB13Q8IY85 973 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 ZMIZ2Q8NF64 920 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 COG1Q8WTW3 980 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 DDX1Q92499 740 aaKnown RBP6.28□□□□□ -1.4
CNGA1-202ENST00000402813 SHC3Q92529 594 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 SPATA17Q96L03 361 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 PIGSQ96S52 555 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 SAP130Q9H0E3 1048 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 AAASQ9NRG9 546 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 CWC15Q9P013 229 aaKnown RBP6.28□□□□□ -1.4
CNGA1-202ENST00000402813 FAM8A1Q9UBU6 413 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 FAM198AQ9UFP1 575 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 TRAK1Q9UPV9 953 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 GIT1Q9Y2X7 761 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 SNX8Q9Y5X2 465 aa6.28□□□□□ -1.4
CNGA1-202ENST00000402813 POTECB2RU33 542 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 SLITRK3O94933 977 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 PLATP00750 562 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 OPN1MWP04001 364 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 OPN1MW2P0DN77 364 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 OPN1MW3P0DN78 364 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 ATP4AP20648 1035 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 ATP5DP30049 168 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 GIPRP48546 466 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 CLCN6P51797 869 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 ARFIP1P53367 373 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 GEN1Q17RS7 908 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 RPUSD3Q6P087 351 aaKnown RBP6.27□□□□□ -1.41
CNGA1-202ENST00000402813 B3GNT9Q6UX72 402 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 GALNT7Q86SF2 657 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 TNPO1Q92973 898 aaKnown RBP6.27□□□□□ -1.41
CNGA1-202ENST00000402813 CLUHP3Q96NS8 147 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 STK31Q9BXU1 1019 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 GRPEL1Q9HAV7 217 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 ATP13A1Q9HD20 1204 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 WASH6PQ9NQA3 447 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 CALCOCO1Q9P1Z2 691 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 DNM3Q9UQ16 869 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 NUDCQ9Y266 331 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 SSX2IPQ9Y2D8 614 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 KIF3AQ9Y496 699 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 BCORL1Q5H9F3 1711 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 MYO3AQ8NEV4 1616 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 A6NNZ2 444 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 UBXN8O00124 270 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 EIF1AYO14602 144 aaKnown RBP6.27□□□□□ -1.41
CNGA1-202ENST00000402813 ADCY3O60266 1144 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 YEATS4O95619 227 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 EOMESO95936 686 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 RHOXF2BP0C7M4 288 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 COL6A2P12110 1019 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 KLHL30Q0D2K2 578 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 SMAD4Q13485 552 aaKnown RBP6.27□□□□□ -1.41
CNGA1-202ENST00000402813 METTL11BQ5VVY1 283 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 ATG9AQ7Z3C6 839 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 CCDC84Q86UT8 332 aaPredicted RBP6.27□□□□□ -1.41
CNGA1-202ENST00000402813 TRIM42Q8IWZ5 723 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 OR6C4Q8NGE1 309 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 LEO1Q8WVC0 666 aaPredicted RBP6.27□□□□□ -1.41
CNGA1-202ENST00000402813 RHOXF2Q9BQY4 288 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 CRACR2AQ9BSW2 395 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 LRCH1Q9Y2L9 728 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 DISP1Q96F81 1524 aa6.27□□□□□ -1.41
CNGA1-202ENST00000402813 PLD2O14939 933 aa6.26□□□□□ -1.41
CNGA1-202ENST00000402813 AOC2O75106 756 aa6.26□□□□□ -1.41
CNGA1-202ENST00000402813 DDHD2O94830 711 aa6.26□□□□□ -1.41
CNGA1-202ENST00000402813 S100A6P06703 90 aa6.26□□□□□ -1.41
CNGA1-202ENST00000402813 ADRB2P07550 413 aa6.26□□□□□ -1.41
CNGA1-202ENST00000402813 ARAFP10398 606 aa6.26□□□□□ -1.41
CNGA1-202ENST00000402813 NOS3P29474 1203 aa6.26□□□□□ -1.41
CNGA1-202ENST00000402813 NOP2P46087 812 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms