RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 CDHR1Q96JP9 859 aa14.46□□□□□ -0.1
PSMA1-201ENST00000396394 RNPC3Q96LT9 517 aaKnown RBP14.46□□□□□ -0.1
PSMA1-201ENST00000396394 RNF26Q9BY78 433 aaPredicted RBP14.46□□□□□ -0.1
PSMA1-201ENST00000396394 EHMT1Q9H9B1 1298 aa14.46□□□□□ -0.1
PSMA1-201ENST00000396394 IL23AQ9NPF7 189 aa14.46□□□□□ -0.1
PSMA1-201ENST00000396394 PCDHA6Q9UN73 950 aa14.46□□□□□ -0.1
PSMA1-201ENST00000396394 PCDHA8Q9Y5H6 950 aa14.46□□□□□ -0.1
PSMA1-201ENST00000396394 SCN10AQ9Y5Y9 1956 aa14.45□□□□□ -0.1
PSMA1-201ENST00000396394 HAS3O00219 553 aa14.45□□□□□ -0.1
PSMA1-201ENST00000396394 MAFGO15525 162 aa14.45□□□□□ -0.1
PSMA1-201ENST00000396394 PPFIA3O75145 1194 aa14.45□□□□□ -0.1
PSMA1-201ENST00000396394 F2P00734 622 aa14.45□□□□□ -0.1
PSMA1-201ENST00000396394 FOSP01100 380 aaPredicted RBP14.45□□□□□ -0.1
PSMA1-201ENST00000396394 SAFBQ15424 915 aaKnown RBP eCLIP14.45□□□□□ -0.1
PSMA1-201ENST00000396394 PFKFB3Q16875 520 aaPredicted RBP14.45□□□□□ -0.1
PSMA1-201ENST00000396394 TMEM240Q5SV17 173 aa14.45□□□□□ -0.1
PSMA1-201ENST00000396394 PSRC1Q6PGN9 363 aaPredicted RBP14.45□□□□□ -0.1
PSMA1-201ENST00000396394 METTL7BQ6UX53 244 aa14.45□□□□□ -0.1
PSMA1-201ENST00000396394 RPUSD2Q8IZ73 545 aaKnown RBP14.45□□□□□ -0.1
PSMA1-201ENST00000396394 GPRASP2Q96D09 838 aa14.45□□□□□ -0.1
PSMA1-201ENST00000396394 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.45□□□□□ -0.11e-7■■□□□ 11.7
PSMA1-201ENST00000396394 SLC26A6Q9BXS9 759 aa14.45□□□□□ -0.1
PSMA1-201ENST00000396394 LAMA2P24043 3122 aaKnown RBP14.44□□□□□ -0.1
PSMA1-201ENST00000396394 SMCO2A6NFE2 343 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 STXBP3O00186 592 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 MMP1P03956 469 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 CYP2C9P11712 490 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 CDC25BP30305 580 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 NDUFA8P51970 172 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 SEMA3FQ13275 785 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 UBE2SQ16763 222 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 TYW1BQ6NUM6 668 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 LUZP1Q86V48 1076 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 PLA2G4DQ86XP0 818 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 NOSTRINQ8IVI9 506 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 DEFB123Q8N688 67 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 C7orf31Q8N865 590 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 AIFM3Q96NN9 605 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 BPIFA3Q9BQP9 254 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 NAT10Q9H0A0 1025 aaKnown RBP14.44□□□□□ -0.1
PSMA1-201ENST00000396394 GJB4Q9NTQ9 266 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 KIAA1468Q9P260 1216 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 GTF2IRD1Q9UHL9 959 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 NOD1Q9Y239 953 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 HPSEQ9Y251 543 aa14.44□□□□□ -0.1
PSMA1-201ENST00000396394 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.44□□□□□ -0.16e-8■■■■□ 19.8
PSMA1-201ENST00000396394 UMODL1Q5DID0 1318 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.43□□□□□ -0.1
PSMA1-201ENST00000396394 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.43□□□□□ -0.1
PSMA1-201ENST00000396394 NOP56O00567 594 aaKnown RBP14.43□□□□□ -0.1
PSMA1-201ENST00000396394 PRPF3O43395 683 aaKnown RBP14.43□□□□□ -0.1
PSMA1-201ENST00000396394 CUTAO60888 179 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 PFKMP08237 780 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 PSEN2P49810 448 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 ADCY7P51828 1080 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 CCL23P55773 120 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 CHMP4BP1P59074 171 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 BFSP2Q13515 415 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 MFSD10Q14728 455 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 PTGISQ16647 500 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 KIAA0753Q2KHM9 967 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 RILPL1Q5EBL4 403 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 RASIP1Q5U651 963 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 ZNF365Q70YC5 407 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 CYFIP1Q7L576 1253 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 SDF4Q9BRK5 362 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 C16orf70Q9BSU1 422 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 WNT8AQ9H1J5 351 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 UBIAD1Q9Y5Z9 338 aa14.43□□□□□ -0.1
PSMA1-201ENST00000396394 A0A1B0GVL5 298 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 ZNF202O95125 648 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 FGBP02675 491 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 SCG2P13521 617 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 ITGB5P18084 799 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 RFC2P35250 354 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 CLK2P49760 499 aaKnown RBP14.42□□□□□ -0.1
PSMA1-201ENST00000396394 AKAP17AQ02040 695 aaKnown RBP14.42□□□□□ -0.1
PSMA1-201ENST00000396394 AP3B2Q13367 1082 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 MCTP2Q6DN12 878 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 GDF6Q6KF10 455 aaPredicted RBP14.42□□□□□ -0.1
PSMA1-201ENST00000396394 CCDC155Q8N6L0 562 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 RETREG2Q8NC44 543 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 CAGE1Q8TC20 777 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 CCDC12Q8WUD4 166 aaPredicted RBP14.42□□□□□ -0.1
PSMA1-201ENST00000396394 HERVK_113Q902F9 699 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 DNAJC25Q9H1X3 360 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 MTIF3Q9H2K0 278 aaKnown RBP14.42□□□□□ -0.1
PSMA1-201ENST00000396394 BCAS3Q9H6U6 928 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 HDAC6Q9UBN7 1215 aa14.42□□□□□ -0.1
PSMA1-201ENST00000396394 H3BRB1 525 aa14.41□□□□□ -0.1
PSMA1-201ENST00000396394 SORBS3O60504 671 aa14.41□□□□□ -0.1
PSMA1-201ENST00000396394 ZNF286BP0CG31 522 aa14.41□□□□□ -0.1
PSMA1-201ENST00000396394 ACRP10323 421 aa14.41□□□□□ -0.1
PSMA1-201ENST00000396394 XBP1P17861 261 aa14.41□□□□□ -0.1
PSMA1-201ENST00000396394 ZNF75DP51815 510 aa14.41□□□□□ -0.1
PSMA1-201ENST00000396394 MTMR1Q13613 665 aa14.41□□□□□ -0.1
PSMA1-201ENST00000396394 GNL2Q13823 731 aaKnown RBP14.41□□□□□ -0.1
PSMA1-201ENST00000396394 RESP18Q5W5W9 173 aa14.41□□□□□ -0.1
PSMA1-201ENST00000396394 ZNF579Q8NAF0 562 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms