RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 ST5P78524 1137 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 DR1Q01658 176 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 PRKCQQ04759 706 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 SULT2A1Q06520 285 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 ACTN3Q08043 901 aaPredicted RBP3.97□□□□□ -1.77
XRCC4-203ENST00000396027 BLMHQ13867 455 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 ELOAQ14241 798 aaKnown RBP3.97□□□□□ -1.77
XRCC4-203ENST00000396027 GNPTABQ3T906 1256 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 SPDYCQ5MJ68 293 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 ZBTB41Q5SVQ8 909 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 PPP4R3AQ6IN85 833 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 KIAA1841Q6NSI8 718 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 C8orf74Q6P047 294 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 TUBA3EQ6PEY2 450 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 ATF7IPQ6VMQ6 1270 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 PRR23BQ6ZRT6 265 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CEP128Q6ZU80 1094 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 RUFY3Q7L099 469 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CACNA2D4Q7Z3S7 1137 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 SRGAP1Q7Z6B7 1085 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 LURAP1LQ8IV03 231 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CCDC146Q8IYE0 955 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CEP57L1Q8IYX8 460 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 TRMT2AQ8IZ69 625 aaKnown RBP3.97□□□□□ -1.77
XRCC4-203ENST00000396027 LSMEM2Q8N112 164 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CCAR2Q8N163 923 aaKnown RBP3.97□□□□□ -1.77
XRCC4-203ENST00000396027 NDUFAF2Q8N183 169 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CHCHD4Q8N4Q1 142 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 SYT2Q8N9I0 419 aaPredicted RBP3.97□□□□□ -1.77
XRCC4-203ENST00000396027 RETREG2Q8NC44 543 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 VTI1AQ96AJ9 217 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 RRP36Q96EU6 259 aaKnown RBP3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CDCA5Q96FF9 252 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 ACSBG1Q96GR2 724 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 TMX3Q96JJ7 454 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 SNX27Q96L92 541 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 MAP3K14Q99558 947 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 DDX21Q9NR30 783 aaKnown RBP eCLIP3.97□□□□□ -1.77
XRCC4-203ENST00000396027 VPS18Q9P253 973 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CTTNBP2NLQ9P2B4 639 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 PPP1R1BQ9UD71 204 aaPredicted RBP3.97□□□□□ -1.77
XRCC4-203ENST00000396027 PPP1R9AQ9ULJ8 1098 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 TMCC3Q9ULS5 477 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 LIMCH1Q9UPQ0 1083 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CAPN7Q9Y6W3 813 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 PLB1Q6P1J6 1458 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 GAKO14976 1311 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 CNTNAP4Q9C0A0 1308 aa3.97□□□□□ -1.77
XRCC4-203ENST00000396027 RTEL1-TNFRSF6BF6WH68 1400 aa3.96□□□□□ -1.77
XRCC4-203ENST00000396027 CCDC194A0A1B0GVG4 234 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CLRN2A0PK11 232 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CFAP69A5D8W1 941 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 GOLGA8KD6RF30 607 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 NDUFAB1O14561 156 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 STRNO43815 780 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 DIAPH1O60610 1272 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 MMP20O60882 483 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 PFDN1O60925 122 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 ZC3H11AO75152 810 aaKnown RBP eCLIP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 PEX14O75381 377 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 TACC1O75410 805 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 GLI1P08151 1106 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 RPSAP08865 295 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 EIF4BP23588 611 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 MATR3P43243 847 aaKnown RBP eCLIP3.96□□□□□ -1.781e-6■■■■□ 25.1
XRCC4-203ENST00000396027 AFMP43652 599 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 OXCT1P55809 520 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CABP4P57796 275 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 ZBED6P86452 979 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 MECOMQ03112 1051 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 XRCC4Q13426 336 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 DGKZQ13574 1117 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 TNIP1Q15025 636 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 LONRF2Q1L5Z9 754 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 ERCC6LQ2NKX8 1250 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 AKNAD1Q5T1N1 836 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CDPF1Q6NVV7 123 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 WDR93Q6P2C0 686 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 KCNV1Q6PIU1 500 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 PACS1Q6VY07 963 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 ATG14Q6ZNE5 492 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 C11orf74Q86VG3 221 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 PLA2G4DQ86XP0 818 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 PASD1Q8IV76 773 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 BRSK2Q8IWQ3 736 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 SCAIQ8N9R8 606 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 TRIML1Q8N9V2 468 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CNNM3Q8NE01 707 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 SUN5Q8TC36 379 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 NETO1Q8TDF5 533 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 PARD3BQ8TEW8 1205 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CACTINQ8WUQ7 758 aaKnown RBP3.96□□□□□ -1.78
XRCC4-203ENST00000396027 MAIP1Q8WWC4 291 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 SLC35B4Q969S0 331 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 SKA1Q96BD8 255 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CFAP36Q96G28 342 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CDHR1Q96JP9 859 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 SPACA7Q96KW9 195 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 CCT7Q99832 543 aa3.96□□□□□ -1.78
XRCC4-203ENST00000396027 HAUS7Q99871 368 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms