RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 ARHGAP27Q6ZUM4 889 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 CERS5Q8N5B7 392 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 CAPS2Q9BXY5 557 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 TSKSQ9UJT2 592 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 HSF2BPO75031 334 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 GNA14O95837 355 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 KRT14P02533 472 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 GCFC2P16383 781 aaKnown RBP13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 HOXA7P31268 230 aaPredicted RBP13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 SCNN1DP51172 638 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 MEI1Q5TIA1 1274 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 COL23A1Q86Y22 540 aaPredicted RBP13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 KRT12Q99456 494 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 GANQ9H2C0 597 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 GDF3Q9NR23 364 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 GRIN2DO15399 1336 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 KRT18P05783 430 aaKnown RBP13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 CORO7P57737 925 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 SHROOM1Q2M3G4 852 aaPredicted RBP13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 GLE1Q53GS7 698 aaKnown RBP13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 AIPL1Q9NZN9 384 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 PCDHGC5Q9Y5F6 944 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 GRID2IPA4D2P6 1211 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 OPA1O60313 960 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 SLC9A1P19634 815 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 NR2F2P24468 414 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 EPS15P42566 896 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 CCT5P48643 541 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 PSMC6P62333 389 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 GNGT1P63211 74 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 GPATCH4Q5T3I0 446 aaKnown RBP13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 ALS2CLQ60I27 953 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 KCTD16Q68DU8 428 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 PACS2Q86VP3 889 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 IFT20Q8IY31 132 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 RUFY1Q96T51 708 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 GOLPH3Q9H4A6 298 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 KCNMB3Q9NPA1 279 aa13.72□□□□□ -0.21
PPP3CB-204ENST00000394829 MEIS1O00470 390 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 BBOX1O75936 387 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 SLC12A3P55017 1021 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 ASIC2Q16515 512 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 CNPY4Q8N129 248 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 CCDC43Q96MW1 224 aaKnown RBP13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 LUC7LQ9NQ29 371 aaKnown RBP13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 RNF14Q9UBS8 474 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 MAGEA9P43362 315 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 GUCY2FP51841 1108 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 PTK2Q05397 1052 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 PTPROQ16827 1216 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 QRICH1Q2TAL8 776 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 INPP4AQ96PE3 977 aaPredicted RBP13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 P2RX7Q99572 595 aaKnown RBP13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 POLD4Q9HCU8 107 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 PCDHA1Q9Y5I3 950 aa13.71□□□□□ -0.21
PPP3CB-204ENST00000394829 FAM196BA6NMK8 535 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 CETN3O15182 167 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 EPB41P11171 864 aaKnown RBP13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 MMP14P50281 582 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 KCTD19Q17RG1 926 aaPredicted RBP13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 CATSPER3Q86XQ3 398 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 ZC3H3Q8IXZ2 948 aaKnown RBP13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 BCAS4Q8TDM0 211 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 CASKIN2Q8WXE0 1202 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 ANO3Q9BYT9 981 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 BCAS3Q9H6U6 928 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 SWAP70Q9UH65 585 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 HDAC9Q9UKV0 1011 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 LRRC37AA6NMS7 1700 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 FRMD3A2A2Y4 597 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 EIF3HO15372 352 aaKnown RBP eCLIP13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 NFIAQ12857 509 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 DPY19L2P1Q6NXN4 242 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 ZNF571Q7Z3V5 609 aaPredicted RBP13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 IRF2BP2Q7Z5L9 587 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 ZFPM1Q8IX07 1006 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 DHX36Q9H2U1 1008 aaKnown RBP13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 COL11A2P13942 1736 aaPredicted RBP13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 ZNF233A6NK53 670 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 HOXD13P35453 343 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 SNAP25P60880 206 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 PABPC4Q13310 644 aaKnown RBP eCLIP13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 IQCKQ8N0W5 287 aa13.7□□□□□ -0.22
PPP3CB-204ENST00000394829 RAD51CO43502 376 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 ATP1A2P50993 1020 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 NNTQ13423 1086 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 GIT2Q14161 759 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 CDC42EP5Q6NZY7 148 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 KLHL7Q8IXQ5 586 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 YY1AP1Q9H869 796 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 MEIS2O14770 477 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 USP11P51784 963 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 SPIRE1Q08AE8 756 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 PDCLQ13371 301 aa13.69□□□□□ -0.22
PPP3CB-204ENST00000394829 EDRF1Q3B7T1 1238 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms