RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 TLR10Q9BXR5 811 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 PCIF1Q9H4Z3 704 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 FAM153AQ9UHL3 310 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 GPSM2P81274 684 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 E2F5Q15329 346 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 ODR4Q5SWX8 454 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 CCDC50Q8IVM0 306 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 PROM2Q8N271 834 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 RNPC3Q96LT9 517 aaKnown RBP17.6■□□□□ 0.41
PCDH1-203ENST00000394536 FLT1P17948 1338 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.59■□□□□ 0.41
PCDH1-203ENST00000394536 ZNF263O14978 683 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 CTNND1O60716 968 aaKnown RBP17.59■□□□□ 0.41
PCDH1-203ENST00000394536 ICA1Q05084 483 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 MKRN4PQ13434 485 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-203ENST00000394536 MTMR3Q13615 1198 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 SEL1L2Q5TEA6 688 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 GKAP1Q5VSY0 366 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-203ENST00000394536 MMS22LQ6ZRQ5 1243 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 TEKT1Q969V4 418 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 MTMR4Q9NYA4 1195 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 TMOD1P28289 359 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 PTK2Q05397 1052 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 GLYCTKQ8IVS8 523 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 SLFN12Q8IYM2 578 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 ANKRD42Q8N9B4 389 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 MAGOHBQ96A72 148 aaKnown RBP17.59■□□□□ 0.41
PCDH1-203ENST00000394536 NAP1L3Q99457 506 aaPredicted RBP17.59■□□□□ 0.41
PCDH1-203ENST00000394536 ASIC3Q9UHC3 531 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 SNX24Q9Y343 169 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 A0A1W2PQJ5 194 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 GAS7O60861 476 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 MIIPQ5JXC2 388 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 CCDC127Q96BQ5 260 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 MXD3Q9BW11 206 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 METTL14Q9HCE5 456 aaKnown RBP17.59■□□□□ 0.41
PCDH1-203ENST00000394536 DAAM1Q9Y4D1 1078 aa17.59■□□□□ 0.41
PCDH1-203ENST00000394536 BZW2Q9Y6E2 419 aaKnown RBP17.59■□□□□ 0.41
PCDH1-203ENST00000394536 SSU72P8A0A1W2PR75 194 aa17.58■□□□□ 0.41
PCDH1-203ENST00000394536 ZBTB5O15062 677 aa17.58■□□□□ 0.41
PCDH1-203ENST00000394536 EEF2P13639 858 aaKnown RBP17.58■□□□□ 0.41
PCDH1-203ENST00000394536 GCFC2P16383 781 aaKnown RBP17.58■□□□□ 0.41
PCDH1-203ENST00000394536 MAP2K2P36507 400 aa17.58■□□□□ 0.41
PCDH1-203ENST00000394536 MAGOHP61326 146 aaKnown RBP17.58■□□□□ 0.41
PCDH1-203ENST00000394536 RAB17Q9H0T7 212 aa17.58■□□□□ 0.41
PCDH1-203ENST00000394536 TAF1DQ9H5J8 278 aaPredicted RBP17.58■□□□□ 0.41
PCDH1-203ENST00000394536 FBXL5Q9UKA1 691 aa17.58■□□□□ 0.41
PCDH1-203ENST00000394536 MTUS1Q9ULD2 1270 aa17.58■□□□□ 0.41
PCDH1-203ENST00000394536 EZRP15311 586 aaKnown RBP17.58■□□□□ 0.4
PCDH1-203ENST00000394536 CDC37Q16543 378 aaPredicted RBP17.58■□□□□ 0.4
PCDH1-203ENST00000394536 GJB7Q6PEY0 223 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 BLOC1S4Q9NUP1 217 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 RGL1Q9NZL6 768 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 LSP1P33241 339 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 PDIA5Q14554 519 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 QRICH1Q2TAL8 776 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 PACS2Q86VP3 889 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 CPXCR1Q8N123 301 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 ATP6V1G3Q96LB4 118 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 AMNQ9BXJ7 453 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 GLT8D2Q9H1C3 349 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 LMTK3Q96Q04 1460 aa17.58■□□□□ 0.4
PCDH1-203ENST00000394536 CCDC169A6NNP5 214 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 NKRFO15226 690 aaKnown RBP eCLIP17.57■□□□□ 0.4
PCDH1-203ENST00000394536 PPP1R37O75864 691 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 SERPINB2P05120 415 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 KRT5P13647 590 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 COPB2P35606 906 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 KLHDC7AQ5VTJ3 777 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 HOOK3Q86VS8 718 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 UBL4BQ8N7F7 174 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 BICD1Q96G01 975 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 CELF4Q9BZC1 486 aaKnown RBP17.57■□□□□ 0.4
PCDH1-203ENST00000394536 DBNDD1Q9H9R9 158 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 VEZTQ9HBM0 779 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 A0A1W2PRG0 241 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 PPM1KQ8N3J5 372 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 ANKS1AQ92625 1134 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 PBKQ96KB5 322 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 CEP63Q96MT8 703 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 PNMA5Q96PV4 448 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 CCT8L2Q96SF2 557 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 DNAJC17Q9NVM6 304 aaKnown RBP17.57■□□□□ 0.4
PCDH1-203ENST00000394536 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 HMGB1P1B2RPK0 211 aaPredicted RBP17.57■□□□□ 0.4
PCDH1-203ENST00000394536 NR3C1P04150 777 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 SLURP2P0DP57 97 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 UCHL3P15374 230 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 FMO2Q99518 471 aa17.57■□□□□ 0.4
PCDH1-203ENST00000394536 NOC2LQ9Y3T9 749 aaKnown RBP17.57■□□□□ 0.4
PCDH1-203ENST00000394536 TTI1O43156 1089 aa17.56■□□□□ 0.4
PCDH1-203ENST00000394536 CLTAP09496 248 aa17.56■□□□□ 0.4
PCDH1-203ENST00000394536 SLC30A10Q6XR72 485 aa17.56■□□□□ 0.4
PCDH1-203ENST00000394536 PHLDB2Q86SQ0 1253 aa17.56■□□□□ 0.4
PCDH1-203ENST00000394536 NLRP14Q86W24 1093 aa17.56■□□□□ 0.4
PCDH1-203ENST00000394536 CASKIN2Q8WXE0 1202 aa17.56■□□□□ 0.4
PCDH1-203ENST00000394536 MYO1FO00160 1098 aa17.56■□□□□ 0.4
PCDH1-203ENST00000394536 TULP2O00295 520 aa17.56■□□□□ 0.4
PCDH1-203ENST00000394536 TRIM49P0CI25 452 aa17.56■□□□□ 0.4
PCDH1-203ENST00000394536 TRIM49CP0CI26 452 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms